CpipJ_CPIJ010142 (Culex pipiens)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) CpipJ_CPIJ010142 T174449_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.759 0.759
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.711 0.711
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ010142-RA EBF1 4 97

Links

Other EBF1 family TFs
Other Culex pipiens TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I
Ca_13435 Cicer arietinum Ca_13435 I
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I
MLOC_59305 Hordeum vulgare MLOC_59305 I
LPERR06G17010 Leersia perrieri LPERR06G17010 I
MTR_4g010640 Medicago truncatula MTR_4g010640 I
mgf005189m Mimulus guttatus mgf005189m I
OBART06G20370 Oryza barthii OBART06G20370 I
OB06G28040 Oryza brachyantha OB06G28040 I
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I
BGIOSGA020923 Oryza indica BGIOSGA020923 I
OLONG_016936 Oryza longistaminata OLONG_016936 I
OMERI06G20980 Oryza meridionalis OMERI06G20980 I
ONIVA06G24150 Oryza nivara ONIVA06G24150 I
OPUNC06G18570 Oryza punctata OPUNC06G18570 I
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I
OS06G0604000 Oryza sativa OS06G0604000 I
SHN1 Populus trichocarpa POPTR_0003s02750 I
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I
TCM_027157 Theobroma cacao TCM_027157 I
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I
GRMZM2G106591 Zea mays GRMZM2G106591 I