ACAC_0000654401 (Angiostrongylus cantonensis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) ACAC_0000654401 T174902_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.758 0.758
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.742 0.742
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.742 0.742
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.742 0.742
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.742 0.742
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.742 0.742
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.727 0.727
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACAC_0000654401-mRNA-1 EBF1 3 79

Links

Other EBF1 family TFs
Other Angiostrongylus cantonensis TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK11838.1 Cannabis sativa PK11838.1 N
gene13309-v1.0-hybrid Fragaria vesca gene13309-v1.0-hybrid N
cassava23109.valid.m1 Manihot esculenta cassava23109.valid.m1 N
mgf023989m Mimulus guttatus mgf023989m N
POPTR_0012s13550 Populus trichocarpa POPTR_0012s13550 N
POPTR_0015s13560 Populus trichocarpa POPTR_0015s13560 N
PRUPE_ppa026277mg Prunus persica PRUPE_ppa026277mg N
SapurV1A.1070s0010 Salix purpurea SapurV1A.1070s0010 N
SapurV1A.1447s0080 Salix purpurea SapurV1A.1447s0080 N