HNAJ_0001308901 (Hymenolepis nana)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) HNAJ_0001308901 T174935_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.787 0.787
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.787 0.787
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.787 0.787
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.779 0.779
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.779 0.779
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.779 0.779
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.779 0.779
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HNAJ_0001308901-mRNA-1 EBF1 1 136

Links

Other EBF1 family TFs
Other Hymenolepis nana TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019562 Ailuropoda melanoleuca ENSAMEG00000019562 I
Alligator_sinensis_CCG017363.1 Alligator sinensis Alligator_sinensis_CCG017363.1 I
ENSAMXG00000026471 Astyanax mexicanus ENSAMXG00000026471 I
ENSP00000362296-D1 Bos grunniens ENSP00000362296-D1 I
POU3F4 Bos taurus ENSBTAG00000015712 I
POU3F4 Callithrix jacchus ENSCJAG00000002526 I
POU3F4 Canis familiaris ENSCAFG00000017368 I
POU3F4 Cavia porcellus ENSCPOG00000003372 I
Cmyd_10014303 Chelonia mydas Cmyd_10014303 I
ENSCSAG00000000074 Chlorocebus sabaeus ENSCSAG00000000074 I
POU3F4 Choloepus hoffmanni ENSCHOG00000002799 I
Pou3f4 Dipodomys ordii ENSDORG00000006273 I
POU3F4 Equus caballus ENSECAG00000002519 I
POU3F4 Felis catus ENSFCAG00000011964 I
POU3F4 Homo sapiens ENSG00000196767 D
ENSSTOG00000026467 Ictidomys tridecemlineatus ENSSTOG00000026467 I
ENSLOCG00000017491 Lepisosteus oculatus ENSLOCG00000017491 I
POU3F4 Loxodonta africana ENSLAFG00000015688 I
ENSP00000362296 Macaca fascicularis ENSP00000362296 I
POU3F4 Macaca mulatta ENSMMUG00000003112 I
POU3F4 Microcebus murinus ENSMICG00000017301 I
POU3F4 Monodelphis domestica ENSMODG00000014279 I
ENSMPUG00000020194 Mustela putorius furo ENSMPUG00000020194 I
Pou3f4 Mus musculus ENSMUSG00000056854 D
Myotis_brandtii_POU3F4_10020378 Myotis brandtii Myotis_brandtii_POU3F4_10020378 I
POU3F4 Myotis lucifugus ENSMLUG00000004140 I
ENSOANG00000002241 Ornithorhynchus anatinus ENSOANG00000002241 I
POU3F4 Oryctolagus cuniculus ENSOCUG00000010927 I
POU3F4 Otolemur garnettii ENSOGAG00000002820 I
ENSOARG00000006191 Ovis aries ENSOARG00000006191 I
POU3F4 Pan troglodytes ENSPTRG00000040705 I
ENSPANG00000019402 Papio anubis ENSPANG00000019402 I
ENSPSIG00000000094 Pelodiscus sinensis ENSPSIG00000000094 I
Pvit_02954 Pogona vitticeps Pvit_02954 I
ENSPPYG00000020510 Pongo abelii ENSPPYG00000020510 I
POU3F4 Pteropus vampyrus ENSPVAG00000001305 I
Pou3f4 Rattus norvegicus ENSRNOG00000002784 I
POU3F4 Sus scrofa ENSSSCG00000012454 I
POU3F4 Vicugna pacos ENSVPAG00000010779 I