CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Alligator_sinensis_CCG017634.1 *(Alligator sinensis)* Ets
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00178 (Ets)	IPR000418	Alligator_sinensis_CCG017634.1	T177686_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Spi1 M00155_2.00	Mus musculus	NNNVGGAAVH	DBTTCCBNNN	PBM Badis et al.(2009) Sfpi1_1034	0.995	0.963
Spi1 M01475_2.00	Mus musculus	DDNVGGAASY	RSTTCCBNHH	PBM Wei et al.(2010) Sfpi1	0.995	0.963
SPI1 M02965_2.00	Homo sapiens	RAAAAGMGGAAGTW	WACTTCCKCTTTTY	SELEX Jolma et al.(2013) SPI1_1	0.995	0.963
SPI1 M07944_2.00	Homo sapiens	NRAAWGRGGAASTGRRANN	NNTYYCASTTCCYCWTTYN	ChIP-seq Gerstein et al.(2012) GM12878_PU1_HudsonAlpha	0.995	0.963
SPI1 M07945_2.00	Homo sapiens	AAWGRGGAASTGARAVHNN	NNDBTYTCASTTCCYCWTT	ChIP-seq Gerstein et al.(2012) GM12891_PU1_HudsonAlpha	0.995	0.963
SPI1 M07946_2.00	Homo sapiens	RRAAAGAGGAAGTGV	BCACTTCCTCTTTYY	ChIP-seq Gerstein et al.(2012) K562_PU1_HudsonAlpha	0.995	0.963
SPI1 M08026_2.00	Homo sapiens	VRAAWGRGGAAGTGV	BCACTTCCYCWTTYB	ChIP-seq Chen et al.(2011) SRP005406_SPI1	0.995	0.963
Spi1 M08027_2.00	Mus musculus	VRRAWRRGGAAGWVD	HBWCTTCCYYWTYYB	ChIP-seq Chen et al.(2011) GSE11329_Sfpi1	0.995	0.963
SPI1 M09047_2.00	Homo sapiens	VRAAWGRGGAAGTGRNN	NNYCACTTCCYCWTTYB	Misc Kulakovskiy et al.(2013) SPI1_HUMAN.H11MO.0.A	0.995	0.963
Spi1 M09065_2.00	Mus musculus	VRARWGRGGAAGTGV	BCACTTCCYCWYTYB	Misc Kulakovskiy et al.(2013) SPI1_MOUSE.H11MO.0.A	0.995	0.963
Spi1 M09538_2.00	Mus musculus	WGAGGAAGTG	CACTTCCTCW	Misc Heinz et al.(2010) ThioMac-PU.1_GSE21512	0.995	0.963
SPI1 M10472_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PU1_Q4	0.995	0.963
SPI1 M10473_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PU1_Q6	0.995	0.963
SPI1 M10474_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SPI1_01	0.995	0.963
SPI1 M10475_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SPI1_07	0.995	0.963
SPI1 M10476_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SPI1_08	0.995	0.963
SPI1 M10477_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SPI1_Q5	0.995	0.963
SPIC M03005_2.00	Homo sapiens	NRAAWSVGGAAGTM	KACTTCCBSWTTYN	SELEX Jolma et al.(2013) SPIC_1	0.979	0.637
Spic M01480_2.00	Mus musculus	NNNNRGAAV	BTTCYNNNN	PBM Wei et al.(2010) Spic	0.972	0.625
Spic M03009_2.00	Mus musculus	RAAAAGMGGAAGTW	WACTTCCKCTTTTY	SELEX Jolma et al.(2013) Spic_1	0.972	0.625
SPIB M03008_2.00	Homo sapiens	NAAAAGMGGAAGTD	HACTTCCKCTTTTN	SELEX Jolma et al.(2013) SPIB_1	0.960	0.738
SPIB M04803_2.00	Homo sapiens	DWDGVGGAAGTD	HACTTCCBCHWH	SELEX Yin et al.(2017) SPIB_eDBD_HT-SELEX	0.960	0.738
SPIB M04805_2.00	Homo sapiens	NWWWRVGGAASTN	NASTTCCBYWWWN	SELEX Yin et al.(2017) SPIB_FL_HT-SELEX	0.960	0.738
SPIB M02678_2.00	Homo sapiens	WSMGGAA	TTCCKSW	SELEX Mathelier et al.(2014) MA0081.1	0.960	0.738
SPIB M09064_2.00	Homo sapiens	NRAAWGRGGAAGTGRRD	HYYCACTTCCYCWTTYN	Misc Kulakovskiy et al.(2013) SPIB_HUMAN.H11MO.0.A	0.960	0.738
Spib M09068_2.00	Mus musculus	RAAAGRGGAAGTGRVWN	NWBYCACTTCCYCTTTY	Misc Kulakovskiy et al.(2013) SPIB_MOUSE.H11MO.0.A	0.960	0.738
SPIB M09537_2.00	Homo sapiens	AAARVGGAASTG	CASTTCCBYTTT	Misc Heinz et al.(2010) OCILY3-SPIB_GSE56857	0.960	0.738
SPIB M10519_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SPIB_01	0.960	0.738
SPIB M04804_2.00	Homo sapiens	DAWGRGGAAGTD	HACTTCCYCWTH	SELEX Yin et al.(2017) SPIB_eDBD_Methyl-HT-SELEX	0.960	0.738
SPIB M04806_2.00	Homo sapiens	RWWWGRGGAAGTD	HACTTCCYCWWWY	SELEX Yin et al.(2017) SPIB_FL_Methyl-HT-SELEX	0.960	0.738
Elf5 M01490_2.00	Mus musculus	DNVVGGAARH	DYTTCCBBNH	PBM Wei et al.(2010) Elf5	0.727	0.425
ELF5 M02988_2.00	Homo sapiens	WNVMGGAAGTN	NACTTCCKBNW	SELEX Jolma et al.(2013) ELF5_1	0.727	0.425
ELF5 M02989_2.00	Homo sapiens	WNVMGGAARYN	NRYTTCCKBNW	SELEX Jolma et al.(2013) ELF5_2	0.727	0.425
Elf5 M03011_2.00	Mus musculus	WNVMGGAARYN	NRYTTCCKBNW	SELEX Jolma et al.(2013) Elf5_1	0.727	0.425
ELF5 M04756_2.00	Homo sapiens	NDNVMGGAAGBD	HVCTTCCKBNHN	SELEX Yin et al.(2017) ELF5_eDBD_HT-SELEX	0.727	0.425
ELF5 M04758_2.00	Homo sapiens	NAMCCGGAAGYN	NRCTTCCGGKTN	SELEX Yin et al.(2017) ELF5_FL_HT-SELEX	0.727	0.425
ELF5 M09054_2.00	Homo sapiens	VVVANVMGGAAGHDV	BHDCTTCCKBNTBBB	Misc Kulakovskiy et al.(2013) ELF5_HUMAN.H11MO.0.A	0.727	0.425
Elf5 M09076_2.00	Mus musculus	RGRAVRAGGAAGDRRNN	NNYYHCTTCCTYBTYCY	Misc Kulakovskiy et al.(2013) ELF5_MOUSE.H11MO.0.A	0.727	0.425
ELF5 M09534_2.00	Homo sapiens	ABVMGGAAGT	ACTTCCKBVT	Misc Heinz et al.(2010) T47D-ELF5_GSE30407	0.727	0.425
ELF5 M10501_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ELF5_01	0.727	0.425
ELF5 M04757_2.00	Homo sapiens	NABVAGGAAGTD	HACTTCCTBVTN	SELEX Yin et al.(2017) ELF5_eDBD_Methyl-HT-SELEX	0.727	0.425
ELF5 M04759_2.00	Homo sapiens	DABVAGGAAGTD	HACTTCCTBVTH	SELEX Yin et al.(2017) ELF5_FL_Methyl-HT-SELEX	0.727	0.425
For this family, TFs with SR scores > 0.717* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Alligator_sinensis_CCG017634.1	Ets	149	231	RLYQFLLDLLRNGDMKDSIWWVDKEKGTFQFSSKHKEALANRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFS

Links
Other Ets family TFs
Other *Alligator sinensis* TFs

254 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACYPI45228	Acyrthosiphon pisum	ACYPI45228	N

Alligator_sinensis_CCG017634.1 (Alligator sinensis) Ets

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

254 Related TFs

Alligator_sinensis_CCG017634.1 **(Alligator sinensis)
Ets**