CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G48350
(
Brachypodium distachyon
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
BRADI1G48350
T179128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G48350.1
FAR1
48
136
RLYCDYGHRIGFSVRKGKQSYVIGTRIIRTKDYYCSKEGLKYDEPVTEANFNRPDTRTNCKAMVRFRVDDKGRWTVIRFIPVHNHQLAK
Links
Other
FAR1
family TFs
Other
Brachypodium distachyon
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G45470
Brachypodium distachyon
BRADI3G45470
N
0.708
BRADI4G41960
Brachypodium distachyon
BRADI4G41960
N
0.764
MLOC_13034
Hordeum vulgare
MLOC_13034
N
0.944
MLOC_62808
Hordeum vulgare
MLOC_62808
N
0.742
OB12G13670
Oryza brachyantha
OB12G13670
N
0.764
OB06G14070
Oryza brachyantha
OB06G14070
N
0.910
OB02G27690
Oryza brachyantha
OB02G27690
N
0.708
ORGLA12G0035900
Oryza glaberrima
ORGLA12G0035900
N
0.753
ORGLA06G0040800
Oryza glaberrima
ORGLA06G0040800
N
0.910
ORGLA02G0172700
Oryza glaberrima
ORGLA02G0172700
N
0.708
BGIOSGA006277
Oryza indica
BGIOSGA006277
N
0.708
BGIOSGA037035
Oryza indica
BGIOSGA037035
N
0.753
BGIOSGA022378
Oryza indica
BGIOSGA022378
N
0.910
OLONG_000187
Oryza longistaminata
OLONG_000187
N
0.753
OLONG_014957
Oryza longistaminata
OLONG_014957
N
0.910
ONIVA02G22250
Oryza nivara
ONIVA02G22250
N
0.708
ONIVA06G05610
Oryza nivara
ONIVA06G05610
N
0.910
OS06G0166100
Oryza sativa
OS06G0166100
N
0.910
OS12G0160900
Oryza sativa
OS12G0160900
N
0.753
OS02G0550900
Oryza sativa
OS02G0550900
N
0.708
Pavir.Cb02030
Panicum virgatum
Pavir.Cb02030
N
0.764
Pavir.Ca00202
Panicum virgatum
Pavir.Ca00202
N
0.764
Pavir.Bb02863
Panicum virgatum
Pavir.Bb02863
N
0.933
Pavir.Ba00843
Panicum virgatum
Pavir.Ba00843
N
0.921
Si009370m.g
Setaria italica
Si009370m.g
N
0.764
Si016477m.g
Setaria italica
Si016477m.g
N
0.708
Si029002m.g
Setaria italica
Si029002m.g
N
0.933
Sb02g034560
Sorghum bicolor
Sb02g034560
N
0.933
Sb04g022400
Sorghum bicolor
Sb04g022400
N
0.708
Sb08g003780
Sorghum bicolor
Sb08g003780
N
0.753
Traes_5BS_BCC406654
Triticum aestivum
Traes_5BS_BCC406654
N
0.753
Traes_7DS_559DD9894
Triticum aestivum
Traes_7DS_559DD9894
N
0.933
Traes_7BS_1B525AFF5
Triticum aestivum
Traes_7BS_1B525AFF5
N
0.933
Traes_5DS_620A46565
Triticum aestivum
Traes_5DS_620A46565
N
0.753
Traes_5AS_385093B54
Triticum aestivum
Traes_5AS_385093B54
N
0.753
TRIUR3_03719
Triticum urartu
TRIUR3_03719
N
0.933
TRIUR3_25143
Triticum urartu
TRIUR3_25143
N
0.753
GRMZM2G048987
Zea mays
GRMZM2G048987
N
0.933
GRMZM2G034868
Zea mays
GRMZM2G034868
N
0.764
GRMZM2G043250
Zea mays
GRMZM2G043250
N
0.708