CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si012297m.g
(
Setaria italica
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Si012297m.g
T180391_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si012297m
FAR1
55
152
VFYSGFARRCGFSIRRHRTEGKDGVGRGLTRRYFVCHRAGSAPAKPLAGAPRSQRNRSSSRCGCQAYMRIGRGEAAAGAPPEWRVTGFSDHHNHALLG
Links
Other
FAR1
family TFs
Other
Setaria italica
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_008_00101
Aquilegia coerulea
Aquca_008_00101
N
0.722
FRS11
Arabidopsis thaliana
AT1G10240
N
0.733
Bostr.13671s0465
Boechera stricta
Bostr.13671s0465
N
0.722
BRADI5G11330
Brachypodium distachyon
BRADI5G11330
N
0.778
Bo5g010680
Brassica oleracea
Bo5g010680
N
0.733
PK06148.1
Cannabis sativa
PK06148.1
N
0.733
Cagra.4395s0212
Capsella grandiflora
Cagra.4395s0212
N
0.722
Carubv10012599m.g
Capsella rubella
Carubv10012599m.g
N
0.722
evm.TU.supercontig_113.2
Carica papaya
evm.TU.supercontig_113.2
N
0.700
Ciclev10000456m.g
Citrus clementina
Ciclev10000456m.g
N
0.711
orange1.1g047253m.g
Citrus sinensis
orange1.1g047253m.g
N
0.711
Cucsa.019230
Cucumis sativus
Cucsa.019230
N
0.756
Eucgr.G00085
Eucalyptus grandis
Eucgr.G00085
N
0.722
Thhalv10006984m.g
Eutrema salsugineum
Thhalv10006984m.g
N
0.722
gene29088-v1.0-hybrid
Fragaria vesca
gene29088-v1.0-hybrid
N
0.700
gene05172-v1.0-hybrid
Fragaria vesca
gene05172-v1.0-hybrid
N
0.700
GLYMA10G00380
Glycine max
GLYMA10G00380
N
0.733
Gorai.006G118900
Gossypium raimondii
Gorai.006G118900
N
0.733
MLOC_15705
Hordeum vulgare
MLOC_15705
N
0.767
cassava25471.m1
Manihot esculenta
cassava25471.m1
N
0.756
OB04G20960
Oryza brachyantha
OB04G20960
N
0.844
ORGLA04G0107700
Oryza glaberrima
ORGLA04G0107700
N
0.822
BGIOSGA012540
Oryza indica
BGIOSGA012540
N
0.822
OS04G0443000
Oryza sativa
OS04G0443000
N
0.822
PDK_20s1756181g001
Phoenix dactylifera
PDK_20s1756181g001
N
0.722
POPTR_0004s23620
Populus trichocarpa
POPTR_0004s23620
N
0.744
Pm003854
Prunus mume
Pm003854
N
0.722
PRUPE_ppa002379mg
Prunus persica
PRUPE_ppa002379mg
N
0.722
29685.m000503
Ricinus communis
29685.m000503
N
0.744
SapurV1A.0225s0240
Salix purpurea
SapurV1A.0225s0240
N
0.744
Solyc01g103180.2
Solanum lycopersicum
Solyc01g103180.2
N
0.711
Sb06g017580
Sorghum bicolor
Sb06g017580
N
0.911
TCM_041141
Theobroma cacao
TCM_041141
N
0.733
Traes_2BL_C1DE13045
Triticum aestivum
Traes_2BL_C1DE13045
N
0.767
Traes_2AL_9A4A7514E
Triticum aestivum
Traes_2AL_9A4A7514E
N
0.756
TRIUR3_11057
Triticum urartu
TRIUR3_11057
N
0.756
VIT_12s0035g01360
Vitis vinifera
VIT_12s0035g01360
N
0.733