Carubv10012599m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10012599m.g T181269_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012599m FAR1 62 156

Links

Other FAR1 family TFs
Other Capsella rubella TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.867
FRS11 Arabidopsis thaliana AT1G10240 N 0.967
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 1.000
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.811
Bo5g010680 Brassica oleracea Bo5g010680 N 0.956
PK06148.1 Cannabis sativa PK06148.1 N 0.867
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 1.000
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.911
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.844
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.833
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.844
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.856
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.967
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.844
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.878
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.889
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.789
MDP0000234814 Malus domestica MDP0000234814 N 0.831
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.878
OB04G20960 Oryza brachyantha OB04G20960 N 0.789
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.744
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.744
OS04G0443000 Oryza sativa OS04G0443000 N 0.744
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.844
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.878
Pm003854 Prunus mume Pm003854 N 0.856
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.856
29685.m000503 Ricinus communis 29685.m000503 N 0.900
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.878
Si012297m.g Setaria italica Si012297m.g N 0.722
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.833
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.744
TCM_041141 Theobroma cacao TCM_041141 N 0.889
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.789
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.778
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.778
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.889