CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.F03610
(
Eucalyptus grandis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Eucgr.F03610
T181348_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.F03610.1
FAR1
75
164
TFYNSYARRIGFGTRVSVYQRSRRDGSVVCRQVVCSREGFRRGGGEGKSKKRRRTVTRVGCKAQMTVKKRSSGKWAVSKFVEEHNHELVP
Links
Other
FAR1
family TFs
Other
Eucalyptus grandis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
0.722
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
0.822
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
0.809
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
0.809
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
0.831
MDP0000722905
Malus domestica
MDP0000722905
N
0.811
cassava23935.valid.m1
Manihot esculenta
cassava23935.valid.m1
N
0.787
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
0.820
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
0.854
SapurV1A.0554s0220
Salix purpurea
SapurV1A.0554s0220
N
0.789
TCM_034806
Theobroma cacao
TCM_034806
N
0.798
VIT_18s0122g00530
Vitis vinifera
VIT_18s0122g00530
N
0.811