Pavir.Bb02863 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Bb02863 T181680_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02863.10.p FAR1 53 141
Pavir.Bb02863.11.p FAR1 53 141
Pavir.Bb02863.12.p FAR1 53 141
Pavir.Bb02863.13.p FAR1 53 141
Pavir.Bb02863.14.p FAR1 53 141
Pavir.Bb02863.1.p FAR1 53 141
Pavir.Bb02863.2.p FAR1 53 141
Pavir.Bb02863.3.p FAR1 53 141
Pavir.Bb02863.4.p FAR1 53 141
Pavir.Bb02863.5.p FAR1 53 141
Pavir.Bb02863.6.p FAR1 53 141
Pavir.Bb02863.7.p FAR1 53 141
Pavir.Bb02863.8.p FAR1 53 141
Pavir.Bb02863.9.p FAR1 53 141

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G48350 Brachypodium distachyon BRADI1G48350 N 0.933
BRADI3G45470 Brachypodium distachyon BRADI3G45470 N 0.719
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N 0.753
MLOC_13034 Hordeum vulgare MLOC_13034 N 0.955
MLOC_62808 Hordeum vulgare MLOC_62808 N 0.742
OB12G13670 Oryza brachyantha OB12G13670 N 0.787
OB06G14070 Oryza brachyantha OB06G14070 N 0.966
OB02G27690 Oryza brachyantha OB02G27690 N 0.719
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N 0.775
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N 0.978
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N 0.730
BGIOSGA006277 Oryza indica BGIOSGA006277 N 0.730
BGIOSGA037035 Oryza indica BGIOSGA037035 N 0.775
BGIOSGA022378 Oryza indica BGIOSGA022378 N 0.978
OLONG_000187 Oryza longistaminata OLONG_000187 N 0.775
OLONG_014957 Oryza longistaminata OLONG_014957 N 0.978
ONIVA02G22250 Oryza nivara ONIVA02G22250 N 0.730
ONIVA06G05610 Oryza nivara ONIVA06G05610 N 0.978
OS06G0166100 Oryza sativa OS06G0166100 N 0.978
OS12G0160900 Oryza sativa OS12G0160900 N 0.775
OS02G0550900 Oryza sativa OS02G0550900 N 0.730
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N 0.764
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N 0.764
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N 0.989
Pavir.Aa01718 Panicum virgatum Pavir.Aa01718 N 0.708
PDK_20s1320921g004 Phoenix dactylifera PDK_20s1320921g004 N 0.730
Si009370m.g Setaria italica Si009370m.g N 0.764
Si016477m.g Setaria italica Si016477m.g N 0.719
Si029002m.g Setaria italica Si029002m.g N 1.000
Sb02g034560 Sorghum bicolor Sb02g034560 N 1.000
Sb04g022400 Sorghum bicolor Sb04g022400 N 0.719
Sb08g003780 Sorghum bicolor Sb08g003780 N 0.775
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N 0.753
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N 0.944
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N 0.944
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N 0.753
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N 0.753
TRIUR3_03719 Triticum urartu TRIUR3_03719 N 0.944
TRIUR3_25143 Triticum urartu TRIUR3_25143 N 0.753
GRMZM2G048987 Zea mays GRMZM2G048987 N 1.000
GRMZM2G034868 Zea mays GRMZM2G034868 N 0.764
GRMZM2G043250 Zea mays GRMZM2G043250 N 0.719