CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Db00839
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Db00839
T181705_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db00839.1.p
FAR1
215
295
EFYNLYSWEVGFGIRFGRSRRNSEKTKTIQDIVCICAGRTKEDNTRSYRCGCRAMIRLARLKSGGWYIKEHIAEHNHQLSE
Pavir.Db00839.2.p
FAR1
215
295
EFYNLYSWEVGFGIRFGRSRRNSEKTKTIQDIVCICAGRTKEDNTRSYRCGCRAMIRLARLKSGGWYIKEHIAEHNHQLSE
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia04072
Panicum virgatum
Pavir.Ia04072
N
0.791
Pavir.J04547
Panicum virgatum
Pavir.J04547
N
0.728
Pavir.J20130
Panicum virgatum
Pavir.J20130
N
0.716
Traes_2AL_B21EABE42
Triticum aestivum
Traes_2AL_B21EABE42
N
0.714