CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ea01546
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Ea01546
T181712_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea01546.1.p
FAR1
26
118
QFYNAYALGKGFSVRKSYVEWNSDHTEITLRRYVCSRQGYREDKYVKKEIKKRRPRDITRVECPAKLVIALDRNSGQWYVKNFIDEHNHLLAP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab00925
Panicum virgatum
Pavir.Ab00925
N
0.900
Pavir.Ba03191
Panicum virgatum
Pavir.Ba03191
N
0.878
Pavir.Cb01092
Panicum virgatum
Pavir.Cb01092
N
0.844
Pavir.Da01665
Panicum virgatum
Pavir.Da01665
N
0.911
Pavir.Ea01890
Panicum virgatum
Pavir.Ea01890
N
0.896
Pavir.Eb02394
Panicum virgatum
Pavir.Eb02394
N
0.813
Pavir.Hb01564
Panicum virgatum
Pavir.Hb01564
N
0.843
Pavir.Ib01630
Panicum virgatum
Pavir.Ib01630
N
0.922
Pavir.J30092
Panicum virgatum
Pavir.J30092
N
0.900
Pavir.J35119
Panicum virgatum
Pavir.J35119
N
0.889
Pavir.J35278
Panicum virgatum
Pavir.J35278
N
0.844
Pavir.J35643
Panicum virgatum
Pavir.J35643
N
0.833
Traes_5BL_FC8AB1380
Triticum aestivum
Traes_5BL_FC8AB1380
N
0.850