CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J21189
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J21189
T181838_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J21189.1.p
FAR1
82
175
AFYNAYALRFGFGIRVARSRSERRKGVEVLVMKRFVCLKEGHHKKKPVEPSNKKKRKRLSIRDGCPAMMEVVRRGPDKWVVTKLVLEHNHVIAS
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART09G00070
Oryza barthii
OBART09G00070
N
ORGLA09G0000500
Oryza glaberrima
ORGLA09G0000500
N
BGIOSGA030255
Oryza indica
BGIOSGA030255
N
OMERI09G00050
Oryza meridionalis
OMERI09G00050
N
ONIVA12G18350
Oryza nivara
ONIVA12G18350
N
ORUFI09G00100
Oryza rufipogon
ORUFI09G00100
N
OS09G0101300
Oryza sativa
OS09G0101300
N