CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000789200
(
Hymenolepis microstoma
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
HmN_000789200
T182175_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000789200
FAR1
31
99
RYQGVKFKVASSFRYNEGDPRKETLAYSKATFACVLKRTHHCPSFFRVEVRKGVLQVVERAMEHNHSRI
HmN_000789200
FAR1
136
234
EEATGSGFRVGRSDLFKPGEPERDQFRYRRITYECVHFGQRKSVAANAGTRLMYDLNGSASPRSPTARLGCMAKFDVRYSPQGFKITAVVMKHNHKVSP
Links
Other
FAR1
family TFs
Other
Hymenolepis microstoma
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_18084
Aegilops tauschii
F775_18084
N
BRADI2G23520
Brachypodium distachyon
BRADI2G23520
N
Gorai.002G016500
Gossypium raimondii
Gorai.002G016500
N
MLOC_60455
Hordeum vulgare
MLOC_60455
N
MDP0000323291
Malus domestica
MDP0000323291
N
OBART05G18950
Oryza barthii
OBART05G18950
N
OB05G26550
Oryza brachyantha
OB05G26550
N
ORGLA05G0163800
Oryza glaberrima
ORGLA05G0163800
N
ONIVA05G19800
Oryza nivara
ONIVA05G19800
N
OPUNC05G16540
Oryza punctata
OPUNC05G16540
N
Pavir.J15729
Panicum virgatum
Pavir.J15729
N
Pavir.J06547
Panicum virgatum
Pavir.J06547
N
Si023133m.g
Setaria italica
Si023133m.g
N
Solyc07g052670.2
Solanum lycopersicum
Solyc07g052670.2
N
PGSC0003DMG400026168
Solanum tuberosum
PGSC0003DMG400026168
N
Sb09g022280
Sorghum bicolor
Sb09g022280
N
Traes_1DL_A2C6C77E8
Triticum aestivum
Traes_1DL_A2C6C77E8
N
TRIUR3_14889
Triticum urartu
TRIUR3_14889
N
GRMZM2G061906
Zea mays
GRMZM2G061906
N