CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSTSYG00000005803 *(Tarsius syrichta)* Forkhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00250 (Forkhead)	IPR001766	ENSTSYG00000005803	T187280_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Foxa2 M00162_2.00	Mus musculus	GTAAAYAW	WTRTTTAC	PBM Badis et al.(2009) Foxa2_2830	0.910	1.000
FOXA2 M04815_2.00	Homo sapiens	NHVNRYMAATATTKACNNDN	NHNNGTMAATATTKRYNBDN	SELEX Yin et al.(2017) FOXA2_eDBD_HT-SELEX	0.910	1.000
Foxa2 M08121_2.00	Mus musculus	TRTTTACWYWDN	NHWRWGTAAAYA	ChIP-seq Mathelier et al.(2014) MA0047.2	0.910	1.000
FOXA2 M07959_2.00	Homo sapiens	NNWRWGYAAAYANNN	NNNTRTTTRCWYWNN	ChIP-seq Gerstein et al.(2012) HepG2_FOXA2_HudsonAlpha	0.910	1.000
FOXA2 M09088_2.00	Homo sapiens	NHWRWGTAAACA	TGTTTACWYWDN	Misc Kulakovskiy et al.(2013) FOXA2_HUMAN.H11MO.0.A	0.910	1.000
Foxa2 M09104_2.00	Mus musculus	BNHTRTTKACWYW	WRWGTMAAYADNV	Misc Kulakovskiy et al.(2013) FOXA2_MOUSE.H11MO.0.A	0.910	1.000
FOXA2 M09542_2.00	Homo sapiens	WVWGTMAACANV	BNTGTTKACWBW	Misc Heinz et al.(2010) Liver-Foxa2_GSE25694	0.910	1.000
FOXA2 M10540_2.00	Homo sapiens	WAARYAAAYADKNMV	BKNMHTRTTTRYTTW	Transfac Matys et al.(2006) V$HNF3B_01	0.910	1.000
FOXA2 M10541_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF3B_Q6	0.910	1.000
AAA20679 M10575_2.00	Xenopus laevis	WNWGTMAACAWWMW	WKWWTGTTKACWNW	Transfac Matys et al.(2006) V$XFD3_01	0.910	1.000
FOXA2 M04816_2.00	Homo sapiens	NWRNRYMAATATTKACWNWN	NWNWGTMAATATTKRYNYWN	SELEX Yin et al.(2017) FOXA2_eDBD_Methyl-HT-SELEX	0.910	1.000
FOXA1 M04817_2.00	Homo sapiens	NTRTKTACMYWN	NWRKGTAMAYAN	SELEX Yin et al.(2017) FOXA1_eDBD_HT-SELEX	0.842	0.930
FOXA1 M04819_2.00	Homo sapiens	BVYTAWGTAAACAAWN	NWTTGTTTACWTARBV	SELEX Yin et al.(2017) FOXA1_FL_HT-SELEX_1	0.842	0.930
FOXA1 M04820_2.00	Homo sapiens	HWRWRYAAATATTKACWYWR	YWRWGTMAATATTTRYWYWD	SELEX Yin et al.(2017) FOXA1_FL_HT-SELEX_2	0.842	0.930
FOXA1 M08117_2.00	Homo sapiens	NNNNTRTTTACWYWD	HWRWGTAAAYANNNN	ChIP-seq Mathelier et al.(2014) MA0148.3	0.842	0.930
FOXA1 M07960_2.00	Homo sapiens	NNYWRWGYAAACANN	NNTGTTTRCWYWRNN	ChIP-seq Gerstein et al.(2012) ECC-1_FOXA1_HudsonAlpha	0.842	0.930
FOXA1 M07961_2.00	Homo sapiens	HWRWGTAAAYA	TRTTTACWYWD	ChIP-seq Gerstein et al.(2012) HepG2_FOXA1_HudsonAlpha	0.842	0.930
FOXA1 M07962_2.00	Homo sapiens	NWVWGTAAACA	TGTTTACWBWN	ChIP-seq Gerstein et al.(2012) T-47D_FOXA1_HudsonAlpha	0.842	0.930
FOXA1 M08199_2.00	Homo sapiens	BWRDGTAAACANN	NNTGTTTACHYWV	ChIP-seq Contrino et al.(2012) Mv69	0.842	0.930
FOXA1 M08028_2.00	Homo sapiens	WRWRYAAAYA	TRTTTRYWYW	ChIP-seq Chen et al.(2011) GSE15244_FoxA1	0.842	0.930
FOXA1 M09090_2.00	Homo sapiens	VHWRWGTAAACA	TGTTTACWYWDB	Misc Kulakovskiy et al.(2013) FOXA1_HUMAN.H11MO.0.A	0.842	0.930
Foxa1 M09103_2.00	Mus musculus	TRTTKACWYW	WRWGTMAAYA	Misc Kulakovskiy et al.(2013) FOXA1_MOUSE.H11MO.0.A	0.842	0.930
FOXA1 M09544_2.00	Homo sapiens	WGCCAARRYAAAYANN	NNTRTTTRYYTTGGCW	Misc Heinz et al.(2010) LNCAP-FOXA1_GSE27824_2	0.842	0.930
FOXA1 M09543_2.00	Homo sapiens	WRWGTAAACA	TGTTTACWYW	Misc Heinz et al.(2010) LNCAP-FOXA1_GSE27824_1	0.842	0.930
FOXA1 M09545_2.00	Homo sapiens	WRWGTAAAYA	TRTTTACWYW	Misc Heinz et al.(2010) MCF7-FOXA1_GSE26831	0.842	0.930
FOXA1 M10542_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXA1_02	0.842	0.930
FOXA1 M10543_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXA1_03	0.842	0.930
FOXA1 M10544_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF3A_01	0.842	0.930
FOXA1 M10545_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF3ALPHA_Q6	0.842	0.930
FOXA1 M10546_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF3A_Q6	0.842	0.930
FOXA1 M04818_2.00	Homo sapiens	NWRDGYMAAYAW	WTRTTKRCHYWN	SELEX Yin et al.(2017) FOXA1_eDBD_Methyl-HT-SELEX	0.842	0.930
FOXA1 M04821_2.00	Homo sapiens	BVYTAWGTAAACAAWV	BWTTGTTTACWTARBV	SELEX Yin et al.(2017) FOXA1_FL_Methyl-HT-SELEX_1	0.842	0.930
FOXA1 M04822_2.00	Homo sapiens	YTRWRYAAATATTTACWYAR	YTRWGTAAATATTTRYWYAR	SELEX Yin et al.(2017) FOXA1_FL_Methyl-HT-SELEX_2	0.842	0.930
fkh M03734_2.00	Drosophila melanogaster	WRWGYMAATATTKRCWYW	WRWGYMAATATTKRCWYW	SELEX Nitta et al.(2015) fkh_1	0.835	0.907
fkh M03735_2.00	Drosophila melanogaster	HWASAATAAYAWT	AATRTTATTSTWD	SELEX Nitta et al.(2015) fkh_2	0.835	0.907
fkh M06473_2.00	Drosophila melanogaster	NTRDDYAAACA	TGTTTRHHYAN	B1H Mathelier et al.(2014) MA0446.1	0.835	0.907
fkh M06194_2.00	Drosophila melanogaster	NTRDDYAAACA	TGTTTRHHYAN	B1H Zhu et al.(2011) fkh_NAR_FBgn0000659	0.835	0.907
fkh M08200_2.00	Drosophila melanogaster	NTRDDYAAACA	TGTTTRHHYAN	ChIP-seq Contrino et al.(2012) Mf15	0.835	0.907
fkh M09668_2.00	Drosophila melanogaster	TRTTTRCAHAAG	CTTDTGYAAAYA	Misc Kulakovskiy et al.(2009) fkh	0.835	0.907
FOXA3 M04831_2.00	Homo sapiens	BVYTAWGTAAACAAAN	NTTTGTTTACWTARBV	SELEX Yin et al.(2017) FOXA3_FL_HT-SELEX_1	0.834	0.895
FOXA3 M04832_2.00	Homo sapiens	HWRWGYAAATATTKACWYWD	HWRWGTMAATATTTRCWYWD	SELEX Yin et al.(2017) FOXA3_FL_HT-SELEX_2	0.834	0.895
FOXA3 M09096_2.00	Homo sapiens	HWRWGTMAAYADN	NHTRTTKACWYWD	Misc Kulakovskiy et al.(2013) FOXA3_HUMAN.H11MO.0.B	0.834	0.895
Foxa3 M09106_2.00	Mus musculus	HWRWGTMAAYADN	NHTRTTKACWYWD	Misc Kulakovskiy et al.(2013) FOXA3_MOUSE.H11MO.0.A	0.834	0.895
FOXA3 M10557_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF3G_Q4	0.834	0.895
FOXA3 M04833_2.00	Homo sapiens	CVYTAWGTAAACAAWB	VWTTGTTTACWTARBG	SELEX Yin et al.(2017) FOXA3_FL_Methyl-HT-SELEX_1	0.834	0.895
FOXA3 M04834_2.00	Homo sapiens	HWRWGYAAATATTKACWYWD	HWRWGTMAATATTTRCWYWD	SELEX Yin et al.(2017) FOXA3_FL_Methyl-HT-SELEX_2	0.834	0.895
Q2L6N7_PELSI M01990_2.00	Trionyx sinensis	KTRTTTACA	TGTAAAYAM	PBM Weirauch et al.(2014) pTH5334	0.829	0.872
pha-4 M08123_2.00	Caenorhabditis elegans	WRWGYAAAYA	TRTTTRCWYW	ChIP-seq Mathelier et al.(2014) MA0546.1	0.773	0.837
pha-4 M08201_2.00	Caenorhabditis elegans	GTAAACAR	YTGTTTAC	ChIP-seq Contrino et al.(2012) Mw164	0.773	0.837
pha-4 M09548_2.00	Caenorhabditis elegans	RYAMAYAN	NTRTKTRY	Misc Heinz et al.(2010) cElegans-Embryos-PHA4_modEncode	0.773	0.837
Foxb1 M01983_2.00	Mus musculus	TRTTKAYWYW	WRWRTMAAYA	PBM Weirauch et al.(2014) pTH2808	0.713	0.756
FOXB1 M03028_2.00	Homo sapiens	GAATGACACRGCKV	BMGCYGTGTCATTC	SELEX Jolma et al.(2013) FOXB1_1	0.713	0.756
FOXB1 M03029_2.00	Homo sapiens	WRWGTMAATATTKACWYW	WRWGTMAATATTKACWYW	SELEX Jolma et al.(2013) FOXB1_2	0.713	0.756
FOXB1 M03030_2.00	Homo sapiens	WTRTTKACWTW	WAWGTMAAYAW	SELEX Jolma et al.(2013) FOXB1_3	0.713	0.756
FOXB1 M03031_2.00	Homo sapiens	NTRTTTACW	WGTAAAYAN	SELEX Jolma et al.(2013) FOXB1_4	0.713	0.756
FOXB1 M04837_2.00	Homo sapiens	NWRDGYMAATATTKRCWYWD	HWRWGYMAATATTKRCHYWN	SELEX Yin et al.(2017) FOXB1_eDBD_HT-SELEX	0.713	0.756
FOXB1 M04838_2.00	Homo sapiens	NWRNGYMAATATTKRCDYWD	HWRHGYMAATATTKRCNYWN	SELEX Yin et al.(2017) FOXB1_eDBD_Methyl-HT-SELEX	0.713	0.756
fd96Ca M03743_2.00	Drosophila melanogaster	WRWGYMAATATTKRCWYW	WRWGYMAATATTKRCWYW	SELEX Nitta et al.(2015) fd96Ca_1	0.705	0.698
fd64A M06197_2.00	Drosophila melanogaster	KVWAAACA	TGTTTWBM	B1H Zhu et al.(2011) fd64A_SANGER_5_FBgn0004895	0.703	0.616
For this family, TFs with SR scores > 0.664* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTSYP00000005301	Forkhead	137	226	KPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCY

Links
Other Forkhead family TFs
Other *Tarsius syrichta* TFs

598 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACYPI003796	Acyrthosiphon pisum	ACYPI003796	I	0.000
AAEL010226	Aedes aegypti	AAEL010226	I	0.000
AALB001175	Anopheles albimanus	AALB001175	I	0.000
AARA010786	Anopheles arabiensis	AARA010786	I	0.000
AATE001337	Anopheles atroparvus	AATE001337	I	0.000
ACOM039284	Anopheles coluzzii	ACOM039284	I	0.000
ACUA015759	Anopheles culicifacies	ACUA015759	I	0.000
ADAC004782	Anopheles darlingi	ADAC004782	I	0.000
ADIR011358	Anopheles dirus	ADIR011358	I	0.000
AEPI010093	Anopheles epiroticus	AEPI010093	I	0.000
AFUN010901	Anopheles funestus	AFUN010901	I	0.000
AGAP008814	Anopheles gambiae	AGAP008814	I	0.000
AMAM016616	Anopheles maculatus	AMAM016616	I	0.000
AMEC022127	Anopheles melas	AMEC022127	I	0.000
AMEM007225	Anopheles merus	AMEM007225	I	0.000
AMIN007190	Anopheles minimus	AMIN007190	I	0.000
AQUA004188	Anopheles quadriannulatus	AQUA004188	I	0.000
ASTEI05038	Anopheles stephensi	ASTEI05038	I	0.000
GB41727	Apis mellifera	GB41727	I	0.000
ACEP22357	Atta cephalotes	ACEP22357	I	0.000
BGIBMGA003285	Bombyx mori	BGIBMGA003285	I	0.000
Cflo_06641--XP_394032.3_APIME	Camponotus floridanus	Cflo_06641--XP_394032.3_APIME	I	0.000
CLEC011986	Cimex lectularius	CLEC011986	I	0.000
CpipJ_CPIJ006828	Culex pipiens	CpipJ_CPIJ006828	I	0.000
CPIJ006828	Culex quinquefasciatus	CPIJ006828	I	0.000
KGM_13328	Danaus plexippus	KGM_13328	I	0.000
DAPPUDRAFT_299735	Daphnia pulex	DAPPUDRAFT_299735	I	0.000
YQE_12444	Dendroctonus ponderosae	YQE_12444	I	0.000
GF15779	Drosophila ananassae	FBgn0092803	I	0.000
GG10122	Drosophila erecta	FBgn0102433	I	0.000
GH13857	Drosophila grimshawi	FBgn0121333	I	0.000
da	Drosophila melanogaster	FBgn0000413	D	0.000
GI19105	Drosophila mojavensis	FBgn0141844	I	0.000
GA18660	Drosophila pseudoobscura	FBgn0078660	I	0.000
GM18305	Drosophila sechellia	FBgn0173212	I	0.000
GD23692	Drosophila simulans	FBgn0195069	I	0.000
GJ15409	Drosophila virilis	FBgn0202603	I	0.000
GK12476	Drosophila willistoni	FBgn0214486	I	0.000
GE18936	Drosophila yakuba	FBgn0236308	I	0.000
Hsal_01424--XP_394032.3_APIME	Harpegnathos saltator	Hsal_01424--XP_394032.3_APIME	I	0.000
LDEC016095	Leptinotarsa decemlineata	LDEC016095	I	0.000
LCUP015675	Lucilia cuprina	LCUP015675	I	0.000
LLOJ002325	Lutzomyia longipalpis	LLOJ002325	I	0.000
MESCA003205	Megaselia scalaris	MESCA003205	I	0.000
MDOA011656	Musca domestica	MDOA011656	I	0.000
NV16928	Nasonia vitripennis	NV16928	I	0.000
PHUM374400	Pediculus humanus	PHUM374400	I	0.000
SINV15659	Solenopsis invicta	SINV15659	I	0.000
TC009743	Tribolium castaneum	TC009743	I	0.000
L798_13597	Zootermopsis nevadensis	L798_13597	I	0.000

ENSTSYG00000005803 (Tarsius syrichta) Forkhead

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

598 Related TFs

ENSTSYG00000005803 **(Tarsius syrichta)
Forkhead**