CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TriadG25137 *(Trichoplax adhaerens)* Forkhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00250 (Forkhead)	IPR001766	TriadG25137	T188702_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
daf-16 M01989_2.00	Caenorhabditis elegans	NNRWMAAYAN	NTRTTKWYNN	PBM Weirauch et al.(2014) pTH8995	0.793	0.771
Foxo6 M00798_2.00	Mus musculus	NNNNHHRYDN	NHRYDDNNNN	PBM Weirauch et al.(2013) pTH3477	0.789	0.759
FOXO6 M03049_2.00	Homo sapiens	GTAAACATGTTTAC	GTAAACATGTTTAC	SELEX Jolma et al.(2013) FOXO6_1	0.789	0.759
FOXO6 M03050_2.00	Homo sapiens	GTAAACA	TGTTTAC	SELEX Jolma et al.(2013) FOXO6_2	0.789	0.759
FOXO6 M03051_2.00	Homo sapiens	TTTCCCCACACGMC	GKCGTGTGGGGAAA	SELEX Jolma et al.(2013) FOXO6_3	0.789	0.759
Foxo3 M00797_2.00	Mus musculus	RTMAACAN	NTGTTKAY	PBM Weirauch et al.(2013) pTH3749	0.788	0.783
FOXO3 M03019_2.00	Homo sapiens	GTAAACATGTTTAC	GTAAACATGTTTAC	SELEX Jolma et al.(2013) FOXO3_1	0.788	0.783
FOXO3 M03020_2.00	Homo sapiens	GTAAACAW	WTGTTTAC	SELEX Jolma et al.(2013) FOXO3_2	0.788	0.783
FOXO3 M03021_2.00	Homo sapiens	KTTCCCCACAC	GTGTGGGGAAM	SELEX Jolma et al.(2013) FOXO3_3	0.788	0.783
FOXO3 M04813_2.00	Homo sapiens	HHCCCCACACN	NGTGTGGGGDD	SELEX Yin et al.(2017) FOXO3_eDBD_HT-SELEX	0.788	0.783
FOXO3 M09087_2.00	Homo sapiens	DGTAAACAVV	BBTGTTTACH	Misc Kulakovskiy et al.(2013) FOXO3_HUMAN.H11MO.0.B	0.788	0.783
Foxo3 M09110_2.00	Mus musculus	DGTAAACAVV	BBTGTTTACH	Misc Kulakovskiy et al.(2013) FOXO3_MOUSE.H11MO.0.B	0.788	0.783
FOXO3 M10537_2.00	Homo sapiens	WAHGTAAACAAVND	HNBTTGTTTACDWW	Transfac Matys et al.(2006) V$FOXO3_01	0.788	0.783
FOXO3 M10538_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO3A_Q1	0.788	0.783
FOXO3 M10539_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO3A_Q3	0.788	0.783
FOXO3 M04814_2.00	Homo sapiens	NHCCCCACACV	BGTGTGGGGDN	SELEX Yin et al.(2017) FOXO3_eDBD_Methyl-HT-SELEX	0.788	0.783
Foxo1 M00795_2.00	Mus musculus	NRWMAACAN	NTGTTKWYN	PBM Weirauch et al.(2013) pTH3846	0.781	0.783
FOXO1 M03022_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	SELEX Jolma et al.(2013) FOXO1_1	0.781	0.783
FOXO1 M03023_2.00	Homo sapiens	GTAAACATGTTTAY	RTAAACATGTTTAC	SELEX Jolma et al.(2013) FOXO1_2	0.781	0.783
FOXO1 M03024_2.00	Homo sapiens	TTTCCCCACACD	HGTGTGGGGAAA	SELEX Jolma et al.(2013) FOXO1_3	0.781	0.783
Foxo1 M08122_2.00	Mus musculus	DGTAAACARSH	DSYTGTTTACH	ChIP-seq Mathelier et al.(2014) MA0480.1	0.781	0.783
FOXO1 M09091_2.00	Homo sapiens	NRDAAACAVVVN	NBBBTGTTTHYN	Misc Kulakovskiy et al.(2013) FOXO1_HUMAN.H11MO.0.A	0.781	0.783
Foxo1 M09108_2.00	Mus musculus	RWMAACAVVN	NBBTGTTKWY	Misc Kulakovskiy et al.(2013) FOXO1_MOUSE.H11MO.0.A	0.781	0.783
Foxo1 M09547_2.00	Mus musculus	GTAAACAV	BTGTTTAC	Misc Heinz et al.(2010) RAW-Foxo1_Fan_et_al.	0.781	0.783
FOXO1 M10549_2.00	Homo sapiens	NVWAAACAMN	NKTGTTTWBN	Transfac Matys et al.(2006) V$FOXO1_01	0.781	0.783
FOXO1 M10550_2.00	Homo sapiens	VNHGTAAACAANHH	DDNTTGTTTACDNB	Transfac Matys et al.(2006) V$FOXO1_02	0.781	0.783
FOXO1 M10551_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO1_03	0.781	0.783
FOXO1 M10552_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO1_04	0.781	0.783
FOXO1 M10553_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO1A_Q3	0.781	0.783
FOXO1 M10554_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXO1A_Q5	0.781	0.783
Foxo4 M00794_2.00	Mus musculus	NNRWMAAYAN	NTRTTKWYNN	PBM Weirauch et al.(2013) pTH3731	0.772	0.723
Foxo4 M09107_2.00	Mus musculus	MVWAAACAA	TTGTTTWBK	Misc Kulakovskiy et al.(2013) FOXO4_MOUSE.H11MO.0.C	0.772	0.723
foxo M06198_2.00	Drosophila melanogaster	YVRWAAACA	TGTTTWYBR	B1H Zhu et al.(2011) foxo_SANGER_10_FBgn0038197	0.770	0.819
FOXP1 M00836_2.00	Homo sapiens	NRTMAACANN	NNTGTTKAYN	PBM Gabut et al.(2011) pEX0123	0.667	0.458
FOXP1 M00837_2.00	Homo sapiens	DGTAAACAA	TTGTTTACH	PBM Gabut et al.(2011) pEX0124	0.667	0.458
FOXP1 M01976_2.00	Homo sapiens	RTAAACAA	TTGTTTAY	PBM Weirauch et al.(2014) pTH5656	0.667	0.458
Foxp1 M00793_2.00	Mus musculus	NRTMAAYAN	NTRTTKAYN	PBM Weirauch et al.(2013) pTH3855	0.667	0.458
FOXP1 M04811_2.00	Homo sapiens	NTGTTTRYNRTNNNNNNBNAYRVWMAACAN	NTGTTKWBYRTNVNNNNNNAYNRYAAACAN	SELEX Yin et al.(2017) FOXP1_eDBD_HT-SELEX	0.667	0.458
FOXP1 M08115_2.00	Homo sapiens	NDGTAAACAVNN	NNBTGTTTACHN	ChIP-seq Mathelier et al.(2014) MA0481.2	0.667	0.458
FOXP1 M09086_2.00	Homo sapiens	RKAAACAVM	KBTGTTTMY	Misc Kulakovskiy et al.(2013) FOXP1_HUMAN.H11MO.0.A	0.667	0.458
FOXP1 M09541_2.00	Homo sapiens	NDGTAAACAVNN	NNBTGTTTACHN	Misc Heinz et al.(2010) H9-FOXP1_GSE31006	0.667	0.458
FOXP1 M10536_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXP1_01	0.667	0.458
FOXP1 M04812_2.00	Homo sapiens	NTGTTTRYBRTNNNNNNBNAYRVWMAACAH	DTGTTKWBYRTNVNNNNNNAYVRYAAACAN	SELEX Yin et al.(2017) FOXP1_eDBD_Methyl-HT-SELEX	0.667	0.458
Foxj3 M00160_2.00	Mus musculus	NRTAAACAHN	NDTGTTTAYN	PBM Badis et al.(2009) Foxj3_0982	0.667	0.470
Foxj3 M01981_2.00	Mus musculus	VNHHAYANN	NNTRTDDNB	PBM Weirauch et al.(2014) pTH6591	0.667	0.470
Foxj3 M03055_2.00	Mus musculus	ACGGACACAAT	ATTGTGTCCGT	SELEX Jolma et al.(2013) Foxj3_1	0.667	0.470
Foxj3 M03056_2.00	Mus musculus	GTAAACARTMAACA	TGTTKAYTGTTTAC	SELEX Jolma et al.(2013) Foxj3_2	0.667	0.470
Foxj3 M03057_2.00	Mus musculus	RTAAACAW	WTGTTTAY	SELEX Jolma et al.(2013) Foxj3_3	0.667	0.470
Foxj3 M03058_2.00	Mus musculus	RTAAACAWAAACA	TGTTTWTGTTTAY	SELEX Jolma et al.(2013) Foxj3_4	0.667	0.470
Foxj3 M09102_2.00	Mus musculus	WAAMMATAAACAN	NTGTTTATKKTTW	Misc Kulakovskiy et al.(2013) FOXJ3_MOUSE.H11MO.0.A	0.667	0.470
SPU_007644 M01987_2.00	Strongylocentrotus purpuratus	NNHHAYDNN	NNHRTDDNN	PBM Weirauch et al.(2014) pTH6497	0.666	0.446
FOXJ3 M03046_2.00	Homo sapiens	RTAAAVAA	TTBTTTAY	SELEX Jolma et al.(2013) FOXJ3_1	0.666	0.470
FOXJ3 M03047_2.00	Homo sapiens	GTAAACARTMAACA	TGTTKAYTGTTTAC	SELEX Jolma et al.(2013) FOXJ3_2	0.666	0.470
FOXJ3 M03048_2.00	Homo sapiens	GTAAACATAAACA	TGTTTATGTTTAC	SELEX Jolma et al.(2013) FOXJ3_3	0.666	0.470
FOXJ3 M02736_2.00	Homo sapiens	AAACAATAAACA	TGTTTATTGTTT	SELEX Jolma et al.(2010) FOXJ3_dimer	0.666	0.470
FOXJ3 M02737_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	SELEX Jolma et al.(2010) FOXJ3_monomer	0.666	0.470
FOXJ3 M04859_2.00	Homo sapiens	DYGTMAACAH	DTGTTKACRH	SELEX Yin et al.(2017) FOXJ3_eDBD_HT-SELEX	0.666	0.470
FOXJ3 M09098_2.00	Homo sapiens	WAAMMATAAACAN	NTGTTTATKKTTW	Misc Kulakovskiy et al.(2013) FOXJ3_HUMAN.H11MO.0.A	0.666	0.470
FOXJ3 M04860_2.00	Homo sapiens	RYGTMAACAH	DTGTTKACRY	SELEX Yin et al.(2017) FOXJ3_eDBD_Methyl-HT-SELEX	0.666	0.470
For this family, TFs with SR scores > 0.664* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
TriadP25137	Forkhead	42	133	GNFSYADLITKAIQSSPEQRLTLSQIYEWMVNNVAYFKDKGESNSSAGWKNSIRHNLSLHSRFVRVQNEGTGKSSWWTLNTDAKPGKATRRR

Links
Other Forkhead family TFs
Other *Trichoplax adhaerens* TFs

377 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CADAFLAG00006699	Aspergillus flavus	CADAFLAG00006699	N
ANIA_03420	Aspergillus nidulans	CADANIAG00009619	N
CADAORAG00010935	Aspergillus oryzae	CADAORAG00010935	N
PVAR5_2322	Byssochlamys spectabilis	PVAR5_2322	N
CSUB01_08465	Colletotrichum sublineola	CSUB01_08465	N
PV11_07373	Exophiala sideris	PV11_07373	N
MBR_07707	Metarhizium brunneum	MBR_07707	N
X797_003177	Metarhizium robertsii	X797_003177	N
S40285_02557	Stachybotrys chlorohalonata	S40285_02557	N
S40285_05598	Stachybotrys chlorohalonata	S40285_05598	N

TriadG25137 (Trichoplax adhaerens) Forkhead

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

377 Related TFs

TriadG25137 **(Trichoplax adhaerens)
Forkhead**