CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_04844--XP_391970.3_APIME
(
Camponotus floridanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Cflo_04844--XP_391970.3_APIME
T188979_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.761
0.901
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.761
0.901
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.761
0.901
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.761
0.901
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.761
0.901
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.761
0.901
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.761
0.901
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.761
0.901
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.761
0.901
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.761
0.901
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.684
0.840
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.684
0.840
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.684
0.840
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.684
0.840
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.684
0.840
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.678
0.802
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.678
0.802
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.678
0.802
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.678
0.802
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_04844--XP_391970.3_APIME
Forkhead
503
586
RPPFTYASLIRQSIIESPEKQLTLNEIYNWFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRVENVKGAVWTVDEVEFYKRRPQR
Links
Other
Forkhead
family TFs
Other
Camponotus floridanus
TFs
341 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
Alligator_sinensis_CCG018588.1
Alligator sinensis
Alligator_sinensis_CCG018588.1
N
ENSAPLG00000003822
Anas platyrhynchos
ENSAPLG00000003822
N
MYT1L
Anolis carolinensis
ENSACAG00000005667
N
MYT1
Anolis carolinensis
ENSACAG00000006249
N
ST18
Anolis carolinensis
ENSACAG00000017961
N
Afo_R001804
Aptenodytes forsteri
Afo_R001804
N
Afo_R015783
Aptenodytes forsteri
Afo_R015783
N
ENSAMXG00000002473
Astyanax mexicanus
ENSAMXG00000002473
N
ENSAMXG00000013383
Astyanax mexicanus
ENSAMXG00000013383
N
ENSAMXG00000013895
Astyanax mexicanus
ENSAMXG00000013895
N
ENSBTAP00000004603-D1
Bos grunniens
ENSBTAP00000004603-D1
N
ENSP00000276480-D1
Bos grunniens
ENSP00000276480-D1
N
ST18
Bos taurus
ENSBTAG00000005560
N
ST18
Callithrix jacchus
ENSCJAG00000014630
N
Aan_R008628
Calypte anna
Aan_R008628
N
Aan_R012927
Calypte anna
Aan_R012927
N
ST18
Canis familiaris
ENSCAFG00000006762
N
MYT1
Canis familiaris
ENSCAFG00000013222
N
ST18
Cavia porcellus
ENSCPOG00000005486
N
Cmyd_10014849
Chelonia mydas
Cmyd_10014849
N
ENSCSAG00000006922
Chlorocebus sabaeus
ENSCSAG00000006922
N
ENSCSAG00000014731
Chlorocebus sabaeus
ENSCSAG00000014731
N
myt1a
Danio rerio
ENSDARG00000074030
N
myt1b
Danio rerio
ENSDARG00000102879
N
ST18
Dasypus novemcinctus
ENSDNOG00000009682
N
MYT1L
Dasypus novemcinctus
ENSDNOG00000037275
N
St18
Dipodomys ordii
ENSDORG00000002635
N
ST18
Equus caballus
ENSECAG00000011546
N
ST18
Felis catus
ENSFCAG00000008556
N
ENSFALG00000002053
Ficedula albicollis
ENSFALG00000002053
N
ENSFALG00000010174
Ficedula albicollis
ENSFALG00000010174
N
ENSGMOG00000002744
Gadus morhua
ENSGMOG00000002744
N
ENSGMOG00000006285
Gadus morhua
ENSGMOG00000006285
N
ENSGMOG00000009083
Gadus morhua
ENSGMOG00000009083
N
ENSGMOG00000012782
Gadus morhua
ENSGMOG00000012782
N
ST18
Gallus gallus
ENSGALG00000015254
N
ENSGACG00000013255
Gasterosteus aculeatus
ENSGACG00000013255
N
Gfo_R002934
Geospiza fortis
Gfo_R002934
N
Gfo_R012653
Geospiza fortis
Gfo_R012653
N
ST18
Gorilla gorilla
ENSGGOG00000001223
N
MYT1L
Gorilla gorilla
ENSGGOG00000026335
N
Hsal_01303--XP_394358.3_APIME
Harpegnathos saltator
Hsal_01303--XP_394358.3_APIME
N
HMEL002385
Heliconius melpomene
HMEL002385
N
ST18
Homo sapiens
ENSG00000147488
I
ENSSTOG00000016500
Ictidomys tridecemlineatus
ENSSTOG00000016500
N
ENSLACG00000002582
Latimeria chalumnae
ENSLACG00000002582
N
ENSLACG00000008399
Latimeria chalumnae
ENSLACG00000008399
I
ENSLACG00000014372
Latimeria chalumnae
ENSLACG00000014372
N
ENSLOCG00000005236
Lepisosteus oculatus
ENSLOCG00000005236
N
ENSLOCG00000005847
Lepisosteus oculatus
ENSLOCG00000005847
N
ENSLOCG00000017216
Lepisosteus oculatus
ENSLOCG00000017216
N
MYT1L
Loxodonta africana
ENSLAFG00000002751
N
ENSLAFG00000004212
Loxodonta africana
ENSLAFG00000004212
N
ENSP00000276480
Macaca fascicularis
ENSP00000276480
N
ST18
Macaca mulatta
ENSMMUG00000008439
N
ST18
Monodelphis domestica
ENSMODG00000009635
N
ENSMPUG00000006922
Mustela putorius furo
ENSMPUG00000006922
N
ENSMPUG00000008741
Mustela putorius furo
ENSMPUG00000008741
N
Myt1
Mus musculus
ENSMUSG00000010505
N
St18
Mus musculus
ENSMUSG00000033740
N
Myotis_brandtii_MYT1L_10020908
Myotis brandtii
Myotis_brandtii_MYT1L_10020908
N
Myotis_brandtii_ST18_10012485
Myotis brandtii
Myotis_brandtii_ST18_10012485
N
ST18
Myotis lucifugus
ENSMLUG00000013211
N
NV11201
Nasonia vitripennis
NV11201
N
ENSNLEG00000000678
Nomascus leucogenys
ENSNLEG00000000678
N
ENSNLEG00000010244
Nomascus leucogenys
ENSNLEG00000010244
N
ST18
Ochotona princeps
ENSOPRG00000001335
N
Ogr14932
Ophisaurus gracilis
Ogr14932
N
ENSONIG00000000499
Oreochromis niloticus
ENSONIG00000000499
N
ENSONIG00000009529
Oreochromis niloticus
ENSONIG00000009529
N
ENSONIG00000011665
Oreochromis niloticus
ENSONIG00000011665
N
ENSONIG00000018694
Oreochromis niloticus
ENSONIG00000018694
N
ST18
Ornithorhynchus anatinus
ENSOANG00000007275
N
ENSOANG00000009861
Ornithorhynchus anatinus
ENSOANG00000009861
N
ST18
Oryctolagus cuniculus
ENSOCUG00000013284
N
MYT1L
Oryctolagus cuniculus
ENSOCUG00000016764
N
myt1b
Oryzias latipes
ENSORLG00000002252
N
ST18
Oryzias latipes
ENSORLG00000017500
N
MYT1L
Oryzias latipes
ENSORLG00000017852
N
myt1a
Oryzias latipes
ENSORLG00000020139
N
MYT1L
Otolemur garnettii
ENSOGAG00000010219
N
ST18
Otolemur garnettii
ENSOGAG00000012050
N
ENSOARG00000005304
Ovis aries
ENSOARG00000005304
N
ENSOARG00000013407
Ovis aries
ENSOARG00000013407
N
ST18
Pan troglodytes
ENSPTRG00000020245
N
ENSPANG00000005639
Papio anubis
ENSPANG00000005639
N
ENSPANG00000009233
Papio anubis
ENSPANG00000009233
N
ENSPSIG00000011125
Pelodiscus sinensis
ENSPSIG00000011125
N
ENSPFOG00000005354
Poecilia formosa
ENSPFOG00000005354
N
ENSPFOG00000014046
Poecilia formosa
ENSPFOG00000014046
N
ENSPFOG00000016047
Poecilia formosa
ENSPFOG00000016047
N
ENSPFOG00000017045
Poecilia formosa
ENSPFOG00000017045
N
Pvit_03612
Pogona vitticeps
Pvit_03612
N
Pvit_15314
Pogona vitticeps
Pvit_15314
N
ST18
Pteropus vampyrus
ENSPVAG00000013501
N
MYT1
Pteropus vampyrus
ENSPVAG00000017398
N
St18
Rattus norvegicus
ENSRNOG00000006200
N
Myt1
Rattus norvegicus
ENSRNOG00000017346
N
ENSSHAG00000012193
Sarcophilus harrisii
ENSSHAG00000012193
N
ENSSHAG00000015433
Sarcophilus harrisii
ENSSHAG00000015433
N
SMAR006962
Strigamia maritima
SMAR006962
N
ST18
Sus scrofa
ENSSSCG00000006266
N
ST18
Taeniopygia guttata
ENSTGUG00000010944
N
MYT1
Takifugu rubripes
ENSTRUG00000002124
N
MYT1L
Takifugu rubripes
ENSTRUG00000003414
N
ST18
Takifugu rubripes
ENSTRUG00000006078
N
myt1a
Takifugu rubripes
ENSTRUG00000007068
N
myt1la
Takifugu rubripes
ENSTRUG00000015790
N
ENSTSYG00000008880
Tarsius syrichta
ENSTSYG00000008880
N
ENSTSYG00000010425
Tarsius syrichta
ENSTSYG00000010425
N
myt1b
Tetraodon nigroviridis
ENSTNIG00000003105
N
ENSTNIG00000004354
Tetraodon nigroviridis
ENSTNIG00000004354
N
ST18
Tetraodon nigroviridis
ENSTNIG00000008501
N
ST18
Tursiops truncatus
ENSTTRG00000015387
N
Tal_R003131
Tyto alba
Tal_R003131
N
AAI70264
Xenopus laevis
AAI70264
N
myt1.S
Xenopus laevis
XB-GENE-1009978
N
XP_002934158
Xenopus tropicalis
XP_002934158
N
XP_002942428
Xenopus tropicalis
XP_002942428
N
ENSXMAG00000012857
Xiphophorus maculatus
ENSXMAG00000012857
N
ENSXMAG00000018975
Xiphophorus maculatus
ENSXMAG00000018975
N