CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_1182900
(
Bursaphelenchus xylophilus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
BXY_1182900
T190359_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.774
0.829
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.774
0.829
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.774
0.829
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.774
0.829
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.774
0.829
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.756
0.805
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.756
0.805
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.756
0.805
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.756
0.805
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.756
0.805
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.756
0.805
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.756
0.805
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.756
0.805
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.756
0.805
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.756
0.805
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.738
0.744
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.738
0.744
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.738
0.744
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.738
0.744
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_1182900.1
Forkhead
550
635
RPPYTYASLIRQAIMESKDRQLTLNEIYQWFQETFAYFRRNAATWKNAVRHNLSLHKCFARVEQNVKGAVWTVDDSEFYKRRPQRS
Links
Other
Forkhead
family TFs
Other
Bursaphelenchus xylophilus
TFs
351 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00033p00078670
Amborella trichopoda
AMTR_s00033p00078670
I
Aquca_010_00012
Aquilegia coerulea
Aquca_010_00012
I
fgenesh2_kg.4__196__AT2G22750.1
Arabidopsis lyrata
fgenesh2_kg.4__196__AT2G22750.1
I
fgenesh2_kg.7__2520__AT4G17880.1
Arabidopsis lyrata
fgenesh2_kg.7__2520__AT4G17880.1
I
ATMYC2
Arabidopsis lyrata
scaffold_103634.1
I
scaffold_800152.1
Arabidopsis lyrata
scaffold_800152.1
I
MYC2
Arabidopsis thaliana
AT1G32640
D
AT2G22750
Arabidopsis thaliana
AT2G22750
D
MYC4
Arabidopsis thaliana
AT4G17880
D
BHLH25
Arabidopsis thaliana
AT4G37850
I
MYC3
Arabidopsis thaliana
AT5G46760
D
Bostr.28243s0060
Boechera stricta
Bostr.28243s0060
I
Bostr.30275s0255
Boechera stricta
Bostr.30275s0255
I
Bostr.3359s0090
Boechera stricta
Bostr.3359s0090
I
Bo01130s010
Brassica oleracea
Bo01130s010
I
Bo1g003350
Brassica oleracea
Bo1g003350
I
Bo1g017990
Brassica oleracea
Bo1g017990
I
Bo3g153150
Brassica oleracea
Bo3g153150
I
Bo4g150960
Brassica oleracea
Bo4g150960
I
Bo5g086990
Brassica oleracea
Bo5g086990
I
Bo7g075710
Brassica oleracea
Bo7g075710
I
Bo8g028850
Brassica oleracea
Bo8g028850
I
Bo9g065530
Brassica oleracea
Bo9g065530
I
Bra010178
Brassica rapa
Bra010178
I
Bra010617
Brassica rapa
Bra010617
I
Bra011790
Brassica rapa
Bra011790
I
Bra013128
Brassica rapa
Bra013128
I
Bra013263
Brassica rapa
Bra013263
I
Bra017523
Brassica rapa
Bra017523
I
Bra017527
Brassica rapa
Bra017527
I
Bra024998
Brassica rapa
Bra024998
I
Bra030210
Brassica rapa
Bra030210
I
Bra039924
Brassica rapa
Bra039924
I
PK09122.1
Cannabis sativa
PK09122.1
I
PK11573.1
Cannabis sativa
PK11573.1
I
PK18474.1
Cannabis sativa
PK18474.1
D
Cagra.0751s0023
Capsella grandiflora
Cagra.0751s0023
I
Cagra.3356s0080
Capsella grandiflora
Cagra.3356s0080
I
Cagra.5392s0006
Capsella grandiflora
Cagra.5392s0006
I
Cagra.6066s0006
Capsella grandiflora
Cagra.6066s0006
I
Cagra.7865s0024
Capsella grandiflora
Cagra.7865s0024
I
Carubv10004392m.g
Capsella rubella
Carubv10004392m.g
I
Carubv10006834m.g
Capsella rubella
Carubv10006834m.g
I
Carubv10008586m.g
Capsella rubella
Carubv10008586m.g
I
Carubv10025041m.g
Capsella rubella
Carubv10025041m.g
I
Carubv10028441m.g
Capsella rubella
Carubv10028441m.g
I
evm.TU.supercontig_129.37
Carica papaya
evm.TU.supercontig_129.37
I
evm.TU.supercontig_20.63
Carica papaya
evm.TU.supercontig_20.63
I
Ca_02263
Cicer arietinum
Ca_02263
I
Ca_02264
Cicer arietinum
Ca_02264
I
Ca_09378
Cicer arietinum
Ca_09378
I
Ca_11514
Cicer arietinum
Ca_11514
I
Ca_12352
Cicer arietinum
Ca_12352
I
Cla000123
Citrullus lanatus
Cla000123
I
Cla014288
Citrullus lanatus
Cla014288
I
Ciclev10027158m.g
Citrus clementina
Ciclev10027158m.g
I
Ciclev10027504m.g
Citrus clementina
Ciclev10027504m.g
I
Ciclev10028925m.g
Citrus clementina
Ciclev10028925m.g
I
orange1.1g021208m.g
Citrus sinensis
orange1.1g021208m.g
I
orange1.1g026436m.g
Citrus sinensis
orange1.1g026436m.g
I
orange1.1g037441m.g
Citrus sinensis
orange1.1g037441m.g
I
Cucsa.103630
Cucumis sativus
Cucsa.103630
I
Cucsa.218800
Cucumis sativus
Cucsa.218800
I
Eucgr.H02389
Eucalyptus grandis
Eucgr.H02389
I
Eucgr.H02390
Eucalyptus grandis
Eucgr.H02390
I
Eucgr.H02398
Eucalyptus grandis
Eucgr.H02398
I
Eucgr.I00634
Eucalyptus grandis
Eucgr.I00634
I
Eucgr.I02518
Eucalyptus grandis
Eucgr.I02518
I
Thhalv10000426m.g
Eutrema salsugineum
Thhalv10000426m.g
I
Thhalv10000808m.g
Eutrema salsugineum
Thhalv10000808m.g
I
Thhalv10007075m.g
Eutrema salsugineum
Thhalv10007075m.g
I
Thhalv10024688m.g
Eutrema salsugineum
Thhalv10024688m.g
I
Thhalv10025715m.g
Eutrema salsugineum
Thhalv10025715m.g
I
gene05610-v1.0-hybrid
Fragaria vesca
gene05610-v1.0-hybrid
I
gene05612-v1.0-hybrid
Fragaria vesca
gene05612-v1.0-hybrid
I
gene07355-v1.0-hybrid
Fragaria vesca
gene07355-v1.0-hybrid
I
gene10501-v1.0-hybrid
Fragaria vesca
gene10501-v1.0-hybrid
I
GLYMA01G02251
Glycine max
GLYMA01G02251
I
GLYMA01G12740
Glycine max
GLYMA01G12740
I
GLYMA01G40620
Glycine max
GLYMA01G40620
I
GLYMA05G23530
Glycine max
GLYMA05G23530
I
GLYMA07G30420
Glycine max
GLYMA07G30420
I
GLYMA08G06831
Glycine max
GLYMA08G06831
I
GLYMA08G36720
Glycine max
GLYMA08G36720
I
GLYMA09G33730
Glycine max
GLYMA09G33730
I
GLYMA11G04681
Glycine max
GLYMA11G04681
I
GLYMA11G04690
Glycine max
GLYMA11G04690
I
GLYMA17G16720
Glycine max
GLYMA17G16720
I
Gorai.002G211500
Gossypium raimondii
Gorai.002G211500
I
Gorai.003G034600
Gossypium raimondii
Gorai.003G034600
I
Gorai.003G034700
Gossypium raimondii
Gorai.003G034700
I
Gorai.003G182100
Gossypium raimondii
Gorai.003G182100
I
Gorai.004G184800
Gossypium raimondii
Gorai.004G184800
I
Gorai.007G228900
Gossypium raimondii
Gorai.007G228900
I
Gorai.007G229000
Gossypium raimondii
Gorai.007G229000
I
Gorai.008G087600
Gossypium raimondii
Gorai.008G087600
I
LPERR03G27220
Leersia perrieri
LPERR03G27220
I
Lus10003488.g
Linum usitatissimum
Lus10003488.g
I
Lus10012457.g
Linum usitatissimum
Lus10012457.g
I
Lus10020503.g
Linum usitatissimum
Lus10020503.g
I
Lus10039639.g
Linum usitatissimum
Lus10039639.g
I
Lus10039640.g
Linum usitatissimum
Lus10039640.g
I
chr2.CM0021.380.nc
Lotus japonicus
chr2.CM0021.380.nc
I
chr2.CM0021.410.nc
Lotus japonicus
chr2.CM0021.410.nc
I
chr2.CM0021.440.nc
Lotus japonicus
chr2.CM0021.440.nc
I
chr2.CM0177.830.nc
Lotus japonicus
chr2.CM0177.830.nc
I
chr3.LjT47G05.50.nc
Lotus japonicus
chr3.LjT47G05.50.nc
I
chr5.CM0158.350.nd
Lotus japonicus
chr5.CM0158.350.nd
I
LjT17L12.80.nd
Lotus japonicus
LjT17L12.80.nd
I
MDP0000029168
Malus domestica
MDP0000029168
I
MDP0000136498
Malus domestica
MDP0000136498
I
MDP0000159571
Malus domestica
MDP0000159571
I
MDP0000170202
Malus domestica
MDP0000170202
I
MDP0000174149
Malus domestica
MDP0000174149
I
MDP0000291132
Malus domestica
MDP0000291132
I
MDP0000318216
Malus domestica
MDP0000318216
I
MDP0000502440
Malus domestica
MDP0000502440
I
cassava16019.m1
Manihot esculenta
cassava16019.m1
I
cassava18197.valid.m1
Manihot esculenta
cassava18197.valid.m1
I
cassava20178.m1
Manihot esculenta
cassava20178.m1
I
cassava35671.valid.m1
Manihot esculenta
cassava35671.valid.m1
I
cassava37087.valid.m1
Manihot esculenta
cassava37087.valid.m1
I
MTR_0246s0020
Medicago truncatula
MTR_0246s0020
I
MTR_0246s0050
Medicago truncatula
MTR_0246s0050
I
MTR_4g097950
Medicago truncatula
MTR_4g097950
I
MTR_4g098035
Medicago truncatula
MTR_4g098035
I
MTR_5g014520
Medicago truncatula
MTR_5g014520
I
MTR_5g030430
Medicago truncatula
MTR_5g030430
I
MTR_8g067280
Medicago truncatula
MTR_8g067280
I
mgf002775m
Mimulus guttatus
mgf002775m
I
GSMUA_Achr2G08590_001
Musa acuminata
GSMUA_Achr2G08590_001
I
GSMUA_Achr3G26180_001
Musa acuminata
GSMUA_Achr3G26180_001
I
GSMUA_Achr3G30620_001
Musa acuminata
GSMUA_Achr3G30620_001
I
GSMUA_Achr4G03160_001
Musa acuminata
GSMUA_Achr4G03160_001
I
GSMUA_Achr4G23070_001
Musa acuminata
GSMUA_Achr4G23070_001
I
GSMUA_Achr7G00800_001
Musa acuminata
GSMUA_Achr7G00800_001
I
GSMUA_Achr7G27600_001
Musa acuminata
GSMUA_Achr7G27600_001
I
GSMUA_Achr8G05170_001
Musa acuminata
GSMUA_Achr8G05170_001
I
GSMUA_AchrUn_randomG15440_001
Musa acuminata
GSMUA_AchrUn_randomG15440_001
I
OBART03G32580
Oryza barthii
OBART03G32580
I
ORGLA03G0295100
Oryza glaberrima
ORGLA03G0295100
I
OGLUM03G32210
Oryza glumaepatula
OGLUM03G32210
I
BGIOSGA013493
Oryza indica
BGIOSGA013493
I
OMERI03G29350
Oryza meridionalis
OMERI03G29350
I
ONIVA03G34090
Oryza nivara
ONIVA03G34090
I
OPUNC03G29750
Oryza punctata
OPUNC03G29750
I
ORUFI03G33950
Oryza rufipogon
ORUFI03G33950
I
OS03G0725800
Oryza sativa
OS03G0725800
I
Pavir.J01849
Panicum virgatum
Pavir.J01849
I
Pavir.J35103
Panicum virgatum
Pavir.J35103
I
PDK_20s1394471g002
Phoenix dactylifera
PDK_20s1394471g002
I
PDK_20s1524891g001
Phoenix dactylifera
PDK_20s1524891g001
I
PDK_20s1524891g002
Phoenix dactylifera
PDK_20s1524891g002
I
PDK_20s1611511g001
Phoenix dactylifera
PDK_20s1611511g001
I
estExt_fgenesh1_pg.C_310143
Physcomitrella patens
estExt_fgenesh1_pg.C_310143
I
estExt_fgenesh1_pg.C_420092
Physcomitrella patens
estExt_fgenesh1_pg.C_420092
I
POPTR_0001s29400
Populus trichocarpa
POPTR_0001s29400
I
POPTR_0003s09090
Populus trichocarpa
POPTR_0003s09090
I
POPTR_0005s09810
Populus trichocarpa
POPTR_0005s09810
I
POPTR_0007s14480
Populus trichocarpa
POPTR_0007s14480
I
POPTR_0009s08500
Populus trichocarpa
POPTR_0009s08500
I
Pm002305
Prunus mume
Pm002305
I
Pm021008
Prunus mume
Pm021008
I
Pm023237
Prunus mume
Pm023237
I
PRUPE_ppa002404mg
Prunus persica
PRUPE_ppa002404mg
I
PRUPE_ppa008130mg
Prunus persica
PRUPE_ppa008130mg
I
PRUPE_ppa017640mg
Prunus persica
PRUPE_ppa017640mg
I
28179.m000478
Ricinus communis
28179.m000478
I
28179.m000479
Ricinus communis
28179.m000479
I
29804.m001498
Ricinus communis
29804.m001498
I
SapurV1A.0019s0910
Salix purpurea
SapurV1A.0019s0910
I
SapurV1A.0151s0080
Salix purpurea
SapurV1A.0151s0080
I
SapurV1A.0279s0180
Salix purpurea
SapurV1A.0279s0180
I
SapurV1A.0821s0050
Salix purpurea
SapurV1A.0821s0050
I
SapurV1A.3034s0010
Salix purpurea
SapurV1A.3034s0010
I
SELMODRAFT_34848
Selaginella moellendorffii
SELMODRAFT_34848
I
SELMODRAFT_48361
Selaginella moellendorffii
SELMODRAFT_48361
I
Si036393m.g
Setaria italica
Si036393m.g
I
Solyc01g106460.2
Solanum lycopersicum
Solyc01g106460.2
I
Solyc08g076930.1
Solanum lycopersicum
Solyc08g076930.1
I
PGSC0003DMG400001161
Solanum tuberosum
PGSC0003DMG400001161
I
PGSC0003DMG400005101
Solanum tuberosum
PGSC0003DMG400005101
I
PGSC0003DMG400017535
Solanum tuberosum
PGSC0003DMG400017535
I
PGSC0003DMG402030621
Solanum tuberosum
PGSC0003DMG402030621
I
Sb01g009590
Sorghum bicolor
Sb01g009590
I
TCM_000894
Theobroma cacao
TCM_000894
I
TCM_000895
Theobroma cacao
TCM_000895
I
TCM_006357
Theobroma cacao
TCM_006357
I
VIT_00s0824g00020
Vitis vinifera
VIT_00s0824g00020
I
VIT_00s0927g00010
Vitis vinifera
VIT_00s0927g00010
I
VIT_03s0088g01240
Vitis vinifera
VIT_03s0088g01240
I
VIT_07s0205g00160
Vitis vinifera
VIT_07s0205g00160
I
GRMZM2G019806
Zea mays
GRMZM2G019806
I
GRMZM2G082343
Zea mays
GRMZM2G082343
I