CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_10949
(
Necator americanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
NECAME_10949
T190858_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW
WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.701
0.800
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_10949
Forkhead
1
80
MAIQKRPDKRATLAEIYTFLQEHFDFFRGEYVGWRNSIRHNLSLNDCFVKLPKEAGERGRKGHKWTISDNCEFLLEEGAF
Links
Other
Forkhead
family TFs
Other
Necator americanus
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_04187
Cicer arietinum
Ca_04187
N
Ca_09673
Cicer arietinum
Ca_09673
N
chr4.CM0680.260.nc
Lotus japonicus
chr4.CM0680.260.nc
N
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
MTR_3g096140
Medicago truncatula
MTR_3g096140
N
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N