CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0001702900
(
Strongyloides papillosus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SPAL_0001702900
T191105_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.703
0.671
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.703
0.671
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.703
0.671
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.703
0.671
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.682
0.732
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.682
0.732
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.682
0.732
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.682
0.732
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.682
0.732
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.677
0.720
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.677
0.720
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.677
0.720
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.677
0.720
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.677
0.720
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.677
0.720
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.677
0.720
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.677
0.720
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.677
0.720
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.677
0.720
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0001702900.1
Forkhead
292
376
RPPYTYANLIRQAIKESKSNQLTLNEIYQWFHESFVYFRRNQATWKNAVRHNLSLHKCFVRYEYNDRGAVWTVNDEEYFRRRPHN
Links
Other
Forkhead
family TFs
Other
Strongyloides papillosus
TFs
280 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_508180
Trichomonas vaginalis
TVAG_508180
N
TVAG_330170
Trichomonas vaginalis
TVAG_330170
N
TVAG_385670
Trichomonas vaginalis
TVAG_385670
N
TVAG_389150
Trichomonas vaginalis
TVAG_389150
N
TVAG_400290
Trichomonas vaginalis
TVAG_400290
N
TVAG_435670
Trichomonas vaginalis
TVAG_435670
N
TVAG_443130
Trichomonas vaginalis
TVAG_443130
N
TVAG_469770
Trichomonas vaginalis
TVAG_469770
N
TVAG_477570
Trichomonas vaginalis
TVAG_477570
N
TVAG_488190
Trichomonas vaginalis
TVAG_488190
N
TVAG_500900
Trichomonas vaginalis
TVAG_500900
N
TVAG_324850
Trichomonas vaginalis
TVAG_324850
N
TVAG_515030
Trichomonas vaginalis
TVAG_515030
N
TVAG_519250
Trichomonas vaginalis
TVAG_519250
N
TVAG_519450
Trichomonas vaginalis
TVAG_519450
N
TVAG_525890
Trichomonas vaginalis
TVAG_525890
N
TVAG_531770
Trichomonas vaginalis
TVAG_531770
N
TVAG_533130
Trichomonas vaginalis
TVAG_533130
N
TVAG_556160
Trichomonas vaginalis
TVAG_556160
N
TVAG_557320
Trichomonas vaginalis
TVAG_557320
N
TVAG_580650
Trichomonas vaginalis
TVAG_580650
N
TVAG_594580
Trichomonas vaginalis
TVAG_594580
N
TVAG_104390
Trichomonas vaginalis
TVAG_104390
N
TVAG_023040
Trichomonas vaginalis
TVAG_023040
N
TVAG_029820
Trichomonas vaginalis
TVAG_029820
N
TVAG_031390
Trichomonas vaginalis
TVAG_031390
N
TVAG_033760
Trichomonas vaginalis
TVAG_033760
N
TVAG_044870
Trichomonas vaginalis
TVAG_044870
N
TVAG_045200
Trichomonas vaginalis
TVAG_045200
N
TVAG_051480
Trichomonas vaginalis
TVAG_051480
N
TVAG_081190
Trichomonas vaginalis
TVAG_081190
N
TVAG_084320
Trichomonas vaginalis
TVAG_084320
N
TVAG_089470
Trichomonas vaginalis
TVAG_089470
N
TVAG_015360
Trichomonas vaginalis
TVAG_015360
N
TVAG_107290
Trichomonas vaginalis
TVAG_107290
N
TVAG_125910
Trichomonas vaginalis
TVAG_125910
N
TVAG_157990
Trichomonas vaginalis
TVAG_157990
N
TVAG_176700
Trichomonas vaginalis
TVAG_176700
N
TVAG_189340
Trichomonas vaginalis
TVAG_189340
N
TVAG_207690
Trichomonas vaginalis
TVAG_207690
N
TVAG_217990
Trichomonas vaginalis
TVAG_217990
N
TVAG_265650
Trichomonas vaginalis
TVAG_265650
N
TVAG_293720
Trichomonas vaginalis
TVAG_293720
N
TVAG_313620
Trichomonas vaginalis
TVAG_313620
N