CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00147p00053080
(
Amborella trichopoda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AMTR_s00147p00053080
T191685_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN04353
GATA
106
141
CVDCNTTKTPLWRTGPAGPRSLCNACGIRYRKRRRM
Links
Other
GATA
family TFs
Other
Amborella trichopoda
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G48310
Brachypodium distachyon
BRADI3G48310
N
MLOC_80133
Hordeum vulgare
MLOC_80133
N
OB0054G10020
Oryza brachyantha
OB0054G10020
N
ORGLA02G0203300
Oryza glaberrima
ORGLA02G0203300
N
BGIOSGA008594
Oryza indica
BGIOSGA008594
N
OS02G0608100
Oryza sativa
OS02G0608100
N
Pavir.J27368
Panicum virgatum
Pavir.J27368
N
Si013246m.g
Setaria italica
Si013246m.g
N
Si015741m.g
Setaria italica
Si015741m.g
N
Sb04g025520
Sorghum bicolor
Sb04g025520
N
Traes_4BL_208AF4C7D
Triticum aestivum
Traes_4BL_208AF4C7D
N
Traes_4DL_A9DA4DCF1
Triticum aestivum
Traes_4DL_A9DA4DCF1
N
TRIUR3_03147
Triticum urartu
TRIUR3_03147
N
GRMZM2G117108
Zea mays
GRMZM2G117108
N