BGIOSGA013867 (Oryza indica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 BGIOSGA013867 T191816_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.833
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.807 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.807 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013867-PA GATA 27 62

Links

Other GATA family TFs
Other Oryza indica TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.000
Ca_04928 Cicer arietinum Ca_04928 N 0.000
Cla021101 Citrullus lanatus Cla021101 N 0.000
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.000
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.000
MDP0000687814 Malus domestica MDP0000687814 N 0.000
MDP0000262020 Malus domestica MDP0000262020 N 0.000
MDP0000168695 Malus domestica MDP0000168695 N 0.000
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.000
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.000
mgf013138m Mimulus guttatus mgf013138m N 0.000
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.000
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.000
Pm005865 Prunus mume Pm005865 N 0.000
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.000
30170.m014085 Ricinus communis 30170.m014085 N 0.000
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.000
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.000
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.000
TCM_034098 Theobroma cacao TCM_034098 N 0.000
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.000