Bo1g122970 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo1g122970 T191876_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.806
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g122970.1 GATA 40 75

Links

Other GATA family TFs
Other Brassica oleracea TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006507 Ailuropoda melanoleuca ENSAMEG00000006507 I
ENSP00000354206-D1 Bos grunniens ENSP00000354206-D1 I
ZNF219 Bos taurus ENSBTAG00000021008 I
ZNF219 Callithrix jacchus ENSCJAG00000009382 I
ZNF219 Cavia porcellus ENSCPOG00000022085 I
ENSCSAG00000016599 Chlorocebus sabaeus ENSCSAG00000016599 I
ZNF219 Dasypus novemcinctus ENSDNOG00000019970 I
ZNF219 Equus caballus ENSECAG00000013524 I
ZNF219 Felis catus ENSFCAG00000014887 I
ZNF219 Gorilla gorilla ENSGGOG00000007177 I
ZNF219 Homo sapiens ENSG00000165804 D
ENSSTOG00000024495 Ictidomys tridecemlineatus ENSSTOG00000024495 I
ZNF219 Loxodonta africana ENSLAFG00000007094 I
ENSMMUP00000008515 Macaca fascicularis ENSMMUP00000008515 I
ZNF219 Macaca mulatta ENSMMUG00000006461 I
ENSMPUG00000000156 Mustela putorius furo ENSMPUG00000000156 I
Zfp219 Mus musculus ENSMUSG00000049295 I
Myotis_brandtii_ZNF219_10005327 Myotis brandtii Myotis_brandtii_ZNF219_10005327 I
ZNF219 Myotis lucifugus ENSMLUG00000006987 I
ENSNLEG00000014346 Nomascus leucogenys ENSNLEG00000014346 I
ZNF219 Ochotona princeps ENSOPRG00000004914 I
ZNF219 Oryctolagus cuniculus ENSOCUG00000009922 I
ZNF219 Otolemur garnettii ENSOGAG00000027894 I
ENSOARG00000019679 Ovis aries ENSOARG00000019679 I
ZNF219 Pan troglodytes ENSPTRG00000006114 I
ENSPANG00000007539 Papio anubis ENSPANG00000007539 I
Zfp219 Rattus norvegicus ENSRNOG00000011544 I
ZNF219 Tursiops truncatus ENSTTRG00000004281 I