Bo7g064860 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo7g064860 T191900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g064860.1 GATA 108 143

Links

Other GATA family TFs
Other Brassica oleracea TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004769 Ailuropoda melanoleuca ENSAMEG00000004769 I
ZNF197 Bos taurus ENSBTAG00000037803 I
ENSCSAG00000016621 Chlorocebus sabaeus ENSCSAG00000016621 I
ZNF197 Choloepus hoffmanni ENSCHOG00000013986 I
ZNF197 Dasypus novemcinctus ENSDNOG00000034353 I
ZNF197 Echinops telfairi ENSETEG00000015360 I
ZNF197 Equus caballus ENSECAG00000011611 I
ZNF197 Felis catus ENSFCAG00000021993 I
ZNF197 Homo sapiens ENSG00000186448 D
ENSSTOG00000022902 Ictidomys tridecemlineatus ENSSTOG00000022902 I
ENSP00000345809 Macaca fascicularis ENSP00000345809 I
ZNF197 Macaca mulatta ENSMMUG00000017585 I
ENSMPUG00000002775 Mustela putorius furo ENSMPUG00000002775 I
ENSNLEG00000005974 Nomascus leucogenys ENSNLEG00000005974 I
ZNF197 Ochotona princeps ENSOPRG00000010881 I
ZNF197 Otolemur garnettii ENSOGAG00000028821 I
ENSOARG00000004589 Ovis aries ENSOARG00000004589 I
ENSPANG00000008111 Papio anubis ENSPANG00000008111 I
ENSPPYG00000013958 Pongo abelii ENSPPYG00000013958 I
ZNF197 Procavia capensis ENSPCAG00000009444 I
ZNF197 Pteropus vampyrus ENSPVAG00000013486 I
ZNF197 Sus scrofa ENSSSCG00000011304 I
ZNF197 Tursiops truncatus ENSTTRG00000006738 I
ZNF197 Vicugna pacos ENSVPAG00000006930 I