Bra010563 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra010563 T191945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.862 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.862 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.820 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.820 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010563.1-P GATA 78 113

Links

Other GATA family TFs
Other Brassica rapa TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0E04884g Candida glabrata CAGL0E04884g N 0.000
KNAG_0M00350 Kazachstania naganishii KNAG_0M00350 I 0.000
PAS_chr4_0487 Komagataella pastoris PAS_chr4_0487 I 0.000
KUCA_T00002767001 Kuraishia capsulata KUCA_T00002767001 I 0.000
SAKL0H12958g Lachancea kluyveri SAKL0H12958g N 0.000
NCAS_0B02840 Naumovozyma castellii NCAS_0B02840 N 0.000
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I 0.000
HPODL_00650 Ogataea parapolymorpha HPODL_00650 N 0.000
XP_002493922.1 Pichia pastoris XP_002493922.1 I 0.000
Scas_Contig721.92 Saccharomyces castellii Scas_Contig721.92 N 0.000
AACERI_AaceriAGR172W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR172W N 0.000
TPHA_0C02160 Tetrapisispora phaffii TPHA_0C02160 N 0.000
TDEL_0F05500 Torulaspora delbrueckii TDEL_0F05500 N 0.000
Kpol_529p13 Vanderwaltozyma polyspora Kpol_529p13 N 0.000
ZBAI_01684 Zygosaccharomyces bailii ZBAI_01684 N 0.000
ZBAI_09618 Zygosaccharomyces bailii ZBAI_09618 N 0.000
ZYRO0A09416g Zygosaccharomyces rouxii ZYRO0A09416g N 0.000