Bra011393 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra011393 T191946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.867 1.000
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.867 1.000
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.867 1.000
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.972
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.847 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.847 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.838 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011393.1-P GATA 205 240

Links

Other GATA family TFs
Other Brassica rapa TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_026770 Acremonium chrysogenum ACRE_026770 I
AAEL011092 Aedes aegypti AAEL011092 N
AB01205.1 Alternaria brassicicola AB01205.1 I
M378DRAFT_20771 Amanita muscaria M378DRAFT_20771 N
AOL_s00007g450 Arthrobotrys oligospora AOL_s00007g450 I
ARB_06850 Arthroderma benhamiae ARB_06850 I
MCYG_01846 Arthroderma otae MCYG_01846 I
AGOS_AFL127C Ashbya gossypii AGOS_AFL127C I
fgenesh1_pg.00153_#_202 Aspergillus carbonarius fgenesh1_pg.00153_#_202 I
ACLA_001740 Aspergillus clavatus CADACLAG00000030 I
CADAFLAG00010689 Aspergillus flavus CADAFLAG00010689 I
AFUA_5G03430 Aspergillus fumigatus CADAFUAG00002555 I
ANIA_08211 Aspergillus nidulans CADANIAG00004258 I
CADANGAG00008115 Aspergillus niger CADANGAG00008115 I
CADAORAG00009843 Aspergillus oryzae CADAORAG00009843 I
EURHEDRAFT_374583 Aspergillus ruber EURHEDRAFT_374583 I
ATEG_08071 Aspergillus terreus CADATEAG00004027 I
M437DRAFT_88829 Aureobasidium melanogenum M437DRAFT_88829 I
M438DRAFT_363827 Aureobasidium pullulans M438DRAFT_363827 I
AUEXF2481DRAFT_73501 Aureobasidium subglaciale AUEXF2481DRAFT_73501 I
BAUCODRAFT_567336 Baudoinia compniacensis BAUCODRAFT_567336 I
BBA_06597 Beauveria bassiana BBA_06597 I
COCC4DRAFT_162164 Bipolaris maydis COCC4DRAFT_162164 I
COCSADRAFT_82804 Bipolaris sorokiniana COCSADRAFT_82804 I
COCVIDRAFT_24723 Bipolaris victoriae COCVIDRAFT_24723 I
COCCADRAFT_5842 Bipolaris zeicola COCCADRAFT_5842 I
BDDG_05039 Blastomyces dermatitidis BDDG_05039 I
BGHDH14_bgh06435 Blumeria graminis BGHDH14_bgh06435 I
Bcin02g00190 Botrytis cinerea Bcin02g00190 I
PVAR5_5506 Byssochlamys spectabilis PVAR5_5506 I
CaO19.10013 Candida albicans CaO19.10013 I
CaO19.2476 Candida albicans CaO19.2476 I
CD36_05420 Candida dubliniensis CD36_05420 I
CLUG_00471 Candida lusitaniae CLUG_00471 I
G210_1683 Candida maltosa G210_1683 I
CORT_0B08690 Candida orthopsilosis CORT_0B08690 I
CPAG_04992 Candida parapsilosis CPAG_04992 I
CTRG_04819 Candida tropicalis CTRG_04819 I
A1O1_02396 Capronia coronata A1O1_02396 I
A1O3_00648 Capronia epimyces A1O3_00648 I
PV04_04630 Capronia semiimmersa PV04_04630 I
CERSUDRAFT_111018 Ceriporiopsis subvermispora CERSUDRAFT_111018 I
CHGG_07655 Chaetomium globosum CHGG_07655 I
CTHT_0027590 Chaetomium thermophilum CTHT_0027590 I
Z519_00926 Cladophialophora bantiana Z519_00926 I
G647_04054 Cladophialophora carrionii G647_04054 I
PV07_05545 Cladophialophora immunda PV07_05545 I
A1O5_01000 Cladophialophora psammophila A1O5_01000 I
A1O7_04628 Cladophialophora yegresii A1O7_04628 I
CPUR_02782 Claviceps purpurea CPUR_02782 I
CLUG_00471 Clavispora lusitaniae CLUG_00471 I
CIMG_06555 Coccidioides immitis CIMG_06555 I
CPC735_030240 Coccidioides posadasii CPC735_030240 I
estExt_Genewise1Plus.C_70765 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_70765 I
CFIO01_06489 Colletotrichum fioriniae CFIO01_06489 I
CGGC5_4303 Colletotrichum gloeosporioides CGGC5_4303 I
GLRG_10729 Colletotrichum graminicola GLRG_10729 I
CH063_04817 Colletotrichum higginsianum CH063_04817 I
Cob_08727 Colletotrichum orbiculare Cob_08727 I
CSUB01_10732 Colletotrichum sublineola CSUB01_10732 I
W97_02158 Coniosporium apollinis W97_02158 I
CC1G_01421 Coprinopsis cinerea CC1G_01421 I
CCM_07966 Cordyceps militaris CCM_07966 I
estExt_fgenesh1_pg.C_11736 Cryphonectria parasitica estExt_fgenesh1_pg.C_11736 I
CpipJ_CPIJ009184 Culex pipiens CpipJ_CPIJ009184 N
CPIJ009184 Culex quinquefasciatus CPIJ009184 N
HMPREF1541_08981 Cyphellophora europaea HMPREF1541_08981 I
H072_8579 Dactylellina haptotyla H072_8579 I
DEHA2D02310g Debaryomyces hansenii DEHA2D02310g I
DOTSEDRAFT_72726 Dothistroma septosporum DOTSEDRAFT_72726 I
EPUS_07035 Endocarpon pusillum EPUS_07035 I
EV44_g6012 Erysiphe necator EV44_g6012 I
A1O9_09248 Exophiala aquamarina A1O9_09248 I
HMPREF1120_02353 Exophiala dermatitidis HMPREF1120_02353 I
PV10_06581 Exophiala mesophila PV10_06581 I
PV06_01624 Exophiala oligosperma PV06_01624 I
PV11_02063 Exophiala sideris PV11_02063 I
PV08_02493 Exophiala spinifera PV08_02493 I
PV05_02348 Exophiala xenobiotica PV05_02348 I
FIBRA_08712 Fibroporia radiculosa FIBRA_08712 I
FOMPIDRAFT_1125800 Fomitopsis pinicola FOMPIDRAFT_1125800 I
Z517_06623 Fonsecaea pedrosoi Z517_06623 I
FFUJ_13017 Fusarium fujikuroi FFUJ_13017 I
FGRRES_16557 Fusarium graminearum FGRRES_16557 I
FPSE_05803 Fusarium pseudograminearum FPSE_05803 I
GGTG_06066 Gaeumannomyces graminis GGTG_06066 I
GALMADRAFT_219890 Galerina marginata GALMADRAFT_219890 I
GLOTRDRAFT_136133 Gloeophyllum trabeum GLOTRDRAFT_136133 I
CMQ_2334 Grosmannia clavigera CMQ_2334 I
M413DRAFT_24200 Hebeloma cylindrosporum M413DRAFT_24200 I
HCBG_06506 Histoplasma capsulatum HCBG_06506 I
JAAARDRAFT_201792 Jaapia argillacea JAAARDRAFT_201792 I
KAFR_0A07050 Kazachstania africana KAFR_0A07050 I
KNAG_0F01780 Kazachstania naganishii KNAG_0F01780 I
KLLA0_C16203g Kluyveromyces lactis KLLA0_C16203g I
KLTH0H03410g Kluyveromyces thermotolerans KLTH0H03410g I
Kwal_24206 Kluyveromyces waltii Kwal_24206 I
PAS_chr2-1_0025 Komagataella pastoris PAS_chr2-1_0025 I
KUCA_T00003760001 Kuraishia capsulata KUCA_T00003760001 I
K443DRAFT_676997 Laccaria amethystina K443DRAFT_676997 I
LACBIDRAFT_311495 Laccaria bicolor LACBIDRAFT_311495 I
SAKL0A03674g Lachancea kluyveri SAKL0A03674g I
LALA0_S05e06744g Lachancea lanzarotensis LALA0_S05e06744g I
KLTH0H03410g Lachancea thermotolerans KLTH0H03410g I
LDEC003750 Leptinotarsa decemlineata LDEC003750 N
LEMA_P003470.1 Leptosphaeria maculans LEMA_P003470.1 I
LLOJ009523 Lutzomyia longipalpis LLOJ009523 N
MPH_03949 Macrophomina phaseolina MPH_03949 I
MGG_04878 Magnaporthe oryzae MGG_04878 I
MAPG_04048 Magnaporthe poae MAPG_04048 I
MBM_08533 Marssonina brunnea MBM_08533 I
MAC_04053 Metarhizium acridum MAC_04053 I
MAM_07193 Metarhizium album MAM_07193 I
MANI_025504 Metarhizium anisopliae MANI_025504 I
MBR_07220 Metarhizium brunneum MBR_07220 I
MGU_06069 Metarhizium guizhouense MGU_06069 I
MAJ_08493 Metarhizium majus MAJ_08493 I
X797_006583 Metarhizium robertsii X797_006583 I
MCYG_01846 Microsporum canis MCYG_01846 I
MGYG_04221 Microsporum gypseum MGYG_04221 I
GNLVRS01_PISO0I02516g Millerozyma farinosa GNLVRS01_PISO0I02516g I
GNLVRS01_PISO0J04299g Millerozyma farinosa GNLVRS01_PISO0J04299g I
MPER_01082 Moniliophthora perniciosa MPER_01082 N
Moror_15123 Moniliophthora roreri Moror_15123 N
MYCTH_2301553 Myceliophthora thermophila MYCTH_2301553 I
fgenesh1_pg.C_scaffold_2000567 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_2000567 I
estExt_Genewise1Plus.C_chr_80065 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_80065 I
NCAS_0D03980 Naumovozyma castellii NCAS_0D03980 I
NDAI_0I00930 Naumovozyma dairenensis NDAI_0I00930 I
UCRNP2_8300 Neofusicoccum parvum UCRNP2_8300 I
NFIA_038680 Neosartorya fischeri CADNFIAG00003100 I
NCU01238 Neurospora crassa NCU01238 D
estExt_fgenesh2_pg.C_10495 Neurospora discreta estExt_fgenesh2_pg.C_10495 I
NEUTE1DRAFT_127630 Neurospora tetrasperma NEUTE1DRAFT_127630 I
OIDMADRAFT_165409 Oidiodendron maius OIDMADRAFT_165409 I
F503_04087 Ophiostoma piceae uamh F503_04087 I
PABG_04080 Paracoccidioides brasiliensis PABG_04080 I
PAAG_04304 Paracoccidioides sp lutzii PAAG_04304 I
PAXRUDRAFT_826282 Paxillus rubicundulus PAXRUDRAFT_826282 I
Pc21g15950 Penicillium chrysogenum Pc21g15950 I
PDIP_48900 Penicillium digitatum PDIP_48900 I
PEX1_017870 Penicillium expansum PEX1_017870 I
PITC_013420 Penicillium italicum PITC_013420 I
PMAA_082150 Penicillium marneffei PMAA_082150 I
PDE_09498 Penicillium oxalicum PDE_09498 I
PCH_Pc21g15950 Penicillium rubens PCH_Pc21g15950 I
U727_00430460301 Penicillium solitum U727_00430460301 I
PFICI_11606 Pestalotiopsis fici PFICI_11606 I
SNOG_11200 Phaeosphaeria nodorum SNOG_11200 I
PHACADRAFT_181728 Phanerochaete carnosa PHACADRAFT_181728 I
gww2.2.61.1 Phanerochaete chrysosporium gww2.2.61.1 I
PHLGIDRAFT_35021 Phlebiopsis gigantea PHLGIDRAFT_35021 I
XP_002490905.1 Pichia pastoris XP_002490905.1 I
estExt_gwp_genewisePlus_human.C_chr_1.10215 Pichia stipitis estExt_gwp_genewisePlus_human.C_chr_1.10215 I
PILCRDRAFT_827743 Piloderma croceum PILCRDRAFT_827743 I
PISMIDRAFT_516418 Pisolithus microcarpus PISMIDRAFT_516418 I
M404DRAFT_993392 Pisolithus tinctorius M404DRAFT_993392 I
PLEOSDRAFT_1064481 Pleurotus ostreatus PLEOSDRAFT_1064481 I
PODANS_2_6940 Podospora anserina PODANS_2_6940 I
MYCFIDRAFT_104171 Pseudocercospora fijiensis MYCFIDRAFT_104171 I
GMDG_07609 Pseudogymnoascus destructans GMDG_07609 I
PTT_07707 Pyrenophora teres PTT_07707 I
PTRG_11043 Pyrenophora triticirepentis PTRG_11043 I
Z518_00744 Rhinocladiella mackenziei Z518_00744 I
RPRC014399 Rhodnius prolixus RPRC014399 N
SU7_0694 Saccharomyces arboricola SU7_0694 I
18935_YMR176W Saccharomyces bayanus 18935_YMR176W I
Scas_Contig720.39 Saccharomyces castellii Scas_Contig720.39 I
ECM5 Saccharomyces cerevisiae YMR176W I
SKUD_186004 Saccharomyces kudriavzevii SKUD_186004 I
17061_Multiple Saccharomyces mikatae 17061_Multiple I
16628_YMR176W Saccharomyces paradoxus 16628_YMR176W I
AACERI_AaceriAFL127C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL127C I
SAPIO_CDS8283 Scedosporium apiospermum SAPIO_CDS8283 I
PICST_85882 Scheffersomyces stipitis PICST_85882 I
SBOR_1449 Sclerotinia borealis SBOR_1449 I
SS1G_01477 Sclerotinia sclerotiorum SS1G_01477 I
SERLA73DRAFT_159163 Serpula lacrymans SERLA73DRAFT_159163 I
SETTUDRAFT_92929 Setosphaeria turcica SETTUDRAFT_92929 I
SMAC_03938 Sordaria macrospora SMAC_03938 I
SPAPADRAFT_131982 Spathaspora passalidarum SPAPADRAFT_131982 I
SEPMUDRAFT_46716 Sphaerulina musiva SEPMUDRAFT_46716 I
SPBR_01187 Sporothrix brasiliensis SPBR_01187 I
HMPREF1624_03854 Sporothrix schenckii HMPREF1624_03854 I
S40288_09644 Stachybotrys chartarum S40288_09644 I
S40285_02726 Stachybotrys chlorohalonata S40285_02726 I
SNOG_11200 Stagonospora nodorum SNOG_11200 I
CY34DRAFT_808492 Suillus luteus CY34DRAFT_808492 I
PMAA_082150 Talaromyces marneffei PMAA_082150 I
TSTA_116820 Talaromyces stipitatus TSTA_116820 I
TPHA_0E02720 Tetrapisispora phaffii TPHA_0E02720 I
THITE_2107776 Thielavia terrestris THITE_2107776 I
UCRPA7_3563 Togninia minima UCRPA7_3563 I
VHEMI05600 Torrubiella hemipterigena VHEMI05600 I
TRIATDRAFT_229470 Trichoderma atroviride TRIATDRAFT_229470 I
TEQG_03551 Trichophyton equinum TEQG_03551 I
H101_00678 Trichophyton interdigitale H101_00678 I
TESG_00566 Trichophyton tonsurans TESG_00566 I
TRV_05239 Trichophyton verrucosum TRV_05239 I
GSTUM_00011726001 Tuber melanosporum GSTUM_00011726001 I
UREG_03885 Uncinocarpus reesii UREG_03885 I
UV8b_135 Ustilaginoidea virens UV8b_135 I
PV09_01976 Verruconis gallopava PV09_01976 I
VDBG_07586 Verticillium albo atrum VDBG_07586 I
VDBG_07586 Verticillium alfalfae VDBG_07586 I
VDAG_09307 Verticillium dahliae VDAG_09307 I
BN7_4555 Wickerhamomyces ciferrii BN7_4555 I
YALI0_C16390g Yarrowia lipolytica YALI0_C16390g I
L798_11923 Zootermopsis nevadensis L798_11923 N
ZBAI_04622 Zygosaccharomyces bailii ZBAI_04622 I
ZBAI_06663 Zygosaccharomyces bailii ZBAI_06663 I
ZYRO0E07546g Zygosaccharomyces rouxii ZYRO0E07546g I
Mycgr3G74352 Zymoseptoria tritici Mycgr3G74352 I