CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CCM_01180
(
Cordyceps militaris
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CCM_01180
T192189_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGX96523
GATA
841
876
CANCHTRNTPEWRRGPSGQRDLCNSCGLRWAKQMGR
Links
Other
GATA
family TFs
Other
Cordyceps militaris
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000001476
Astyanax mexicanus
ENSAMXG00000001476
N
0.000
ENSAMXG00000008709
Astyanax mexicanus
ENSAMXG00000008709
N
0.000
hes6
Danio rerio
ENSDARG00000019335
N
0.000
ENSLOCG00000004463
Lepisosteus oculatus
ENSLOCG00000004463
N
0.000
ENSONIG00000007946
Oreochromis niloticus
ENSONIG00000007946
N
0.000
ENSONIG00000009814
Oreochromis niloticus
ENSONIG00000009814
N
0.000
hes6
Oryzias latipes
ENSORLG00000015432
N
0.000
ENSPFOG00000001231
Poecilia formosa
ENSPFOG00000001231
N
0.000
ENSPFOG00000004031
Poecilia formosa
ENSPFOG00000004031
N
0.000
ENSPFOG00000008075
Poecilia formosa
ENSPFOG00000008075
N
0.000
her13
Takifugu rubripes
ENSTRUG00000006688
N
0.000
her13
Tetraodon nigroviridis
ENSTNIG00000014324
N
0.000
hes6
Tetraodon nigroviridis
ENSTNIG00000015237
N
0.000
ENSXMAG00000016200
Xiphophorus maculatus
ENSXMAG00000016200
N
0.000