CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSTBEG00000012146 *(Tupaia belangeri)* GATA
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00320 (GATA)	IPR000679	ENSTBEG00000012146	T193084_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Gata3 M00166_2.00	Mus musculus	NNNHGATHNN	NNDATCDNNN	PBM Badis et al.(2009) Gata3_1024	0.867	1.000
GATA3 M03063_2.00	Homo sapiens	HGATARVV	BBYTATCD	SELEX Jolma et al.(2013) GATA3_1	0.867	1.000
GATA3 M03064_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA3_2	0.867	1.000
GATA3 M04863_2.00	Homo sapiens	HGATAASRATCW	WGATYSTTATCD	SELEX Yin et al.(2017) GATA3_FL_HT-SELEX_1	0.867	1.000
GATA3 M04864_2.00	Homo sapiens	HGATAASATCD	HGATSTTATCD	SELEX Yin et al.(2017) GATA3_FL_HT-SELEX_2	0.867	1.000
Gata3 M05867_2.00	Mus musculus	GATAAN	NTTATC	SMiLE-seq Isakova et al.(2017) GATA3	0.867	1.000
GATA3 M07965_2.00	Homo sapiens	NWGATWRNVATCWSN	NSWGATBNYWATCWN	ChIP-seq Gerstein et al.(2012) T-47D_GATA3_HudsonAlpha	0.867	1.000
GATA3 M09116_2.00	Homo sapiens	DVAGATAAVRD	HYBTTATCTBH	Misc Kulakovskiy et al.(2013) GATA3_HUMAN.H11MO.0.A	0.867	1.000
Gata3 M09122_2.00	Mus musculus	NVWGATAAVVDBH	DVHBBTTATCWBN	Misc Kulakovskiy et al.(2013) GATA3_MOUSE.H11MO.0.A	0.867	1.000
Gata3 M09551_2.00	Mus musculus	AGATBNNNAGATARV	BYTATCTNNNVATCT	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_1	0.867	1.000
Gata3 M09552_2.00	Mus musculus	AGATBDNNNNDSWGATWRNN	NNYWATCWSHNNNNHVATCT	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_2	0.867	1.000
Gata3 M09553_2.00	Mus musculus	NNNNNNWGATNDNATCWNNN	NNNWGATNHNATCWNNNNNN	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_3	0.867	1.000
Gata3 M09554_2.00	Mus musculus	NWGATNNNNATCWNN	NNWGATNNNNATCWN	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_4	0.867	1.000
Gata3 M09555_2.00	Mus musculus	WGATAAVV	BBTTATCW	Misc Heinz et al.(2010) iTreg-Gata3_GSE20898_5	0.867	1.000
GATA3 M10586_2.00	Homo sapiens	NNGATDRNR	YNYHATCNN	Transfac Matys et al.(2006) V$GATA3_01	0.867	1.000
GATA3 M10587_2.00	Homo sapiens	NRWGATAANA	TNTTATCWYN	Transfac Matys et al.(2006) V$GATA3_02	0.867	1.000
GATA3 M10588_2.00	Homo sapiens	ANWGATMWDA	THWKATCWNT	Transfac Matys et al.(2006) V$GATA3_03	0.867	1.000
GATA3 M10589_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA3_Q4	0.867	1.000
GATA3 M04865_2.00	Homo sapiens	WGATAASGATCW	WGATCSTTATCW	SELEX Yin et al.(2017) GATA3_FL_Methyl-HT-SELEX_1	0.867	1.000
GATA3 M04866_2.00	Homo sapiens	WGATAASATCW	WGATSTTATCW	SELEX Yin et al.(2017) GATA3_FL_Methyl-HT-SELEX_2	0.867	1.000
GATA2 M04879_2.00	Homo sapiens	VHGATAHSV	BSDTATCDB	SELEX Yin et al.(2017) GATA2_eDBD_HT-SELEX	0.867	0.985
GATA2 M08125_2.00	Homo sapiens	NNAGATAAGNN	NNCTTATCTNN	ChIP-seq Mathelier et al.(2014) MA0036.3	0.867	0.985
GATA2 M07966_2.00	Homo sapiens	NVWGATAAVVN	NBBTTATCWBN	ChIP-seq Gerstein et al.(2012) HUVEC_GATA2_UCD	0.867	0.985
GATA2 M07967_2.00	Homo sapiens	BKNNNNNNNSWGATAASV	BSTTATCWSNNNNNNNMV	ChIP-seq Gerstein et al.(2012) K562b_GATA2_UCD	0.867	0.985
GATA2 M07968_2.00	Homo sapiens	NNKNNNNNNNVWGATAAV	BTTATCWBNNNNNNNMNN	ChIP-seq Gerstein et al.(2012) K562_GATA2_HudsonAlpha	0.867	0.985
GATA2 M07969_2.00	Homo sapiens	NVWGATAAVV	BBTTATCWBN	ChIP-seq Gerstein et al.(2012) K562_GATA2_UChicago	0.867	0.985
GATA2 M07970_2.00	Homo sapiens	VWGATARVVN	NBBYTATCWB	ChIP-seq Gerstein et al.(2012) SH-SY5Y_GATA2_UCD	0.867	0.985
GATA2 M09119_2.00	Homo sapiens	NKKNNNNNNDVAGATAASV	BSTTATCTBHNNNNNNMMN	Misc Kulakovskiy et al.(2013) GATA2_HUMAN.H11MO.0.A	0.867	0.985
Gata2 M09121_2.00	Mus musculus	DVAGATAASVN	NBSTTATCTBH	Misc Kulakovskiy et al.(2013) GATA2_MOUSE.H11MO.0.A	0.867	0.985
GATA2 M09550_2.00	Homo sapiens	VWGATAAGVN	NBCTTATCWB	Misc Heinz et al.(2010) K562-GATA2_GSE18829	0.867	0.985
GATA2 M10594_2.00	Homo sapiens	BVNGATRNBN	NVNYATCNBV	Transfac Matys et al.(2006) V$GATA2_01	0.867	0.985
GATA2 M10595_2.00	Homo sapiens	NNWGATAASR	YSTTATCWNN	Transfac Matys et al.(2006) V$GATA2_02	0.867	0.985
GATA2 M10596_2.00	Homo sapiens	HSAGATAWBA	TVWTATCWSD	Transfac Matys et al.(2006) V$GATA2_03	0.867	0.985
GATA2 M10597_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA2_Q5	0.867	0.985
GATA2 M04880_2.00	Homo sapiens	NHGATADSV	BSHTATCDN	SELEX Yin et al.(2017) GATA2_eDBD_Methyl-HT-SELEX	0.867	0.985
GATA1 M02738_2.00	Homo sapiens	GATWASMH	DKSTWATC	SELEX Jolma et al.(2010) GATA1_dimer	0.861	0.926
GATA1 M02739_2.00	Homo sapiens	HGATAA	TTATCD	SELEX Jolma et al.(2010) GATA1_monomer	0.861	0.926
GATA1 M04861_2.00	Homo sapiens	GATAAKDNHMTTATC	GATAAKDNHMTTATC	SELEX Yin et al.(2017) GATA1_eDBD_HT-SELEX	0.861	0.926
GATA1 M07963_2.00	Homo sapiens	NSWGATAASVN	NBSTTATCWSN	ChIP-seq Gerstein et al.(2012) K562b_GATA1_UCD	0.861	0.926
GATA1 M07964_2.00	Homo sapiens	NNKNNNNNNNSWGATAAV	BTTATCWSNNNNNNNMNN	ChIP-seq Gerstein et al.(2012) PBDE_GATA1_UCD	0.861	0.926
GATA1 M08202_2.00	Homo sapiens	NBKBNNNNNNSWGATAASVN	NBSTTATCWSNNNNNNVMVN	ChIP-seq Contrino et al.(2012) Mv73	0.861	0.926
GATA1 M08203_2.00	Homo sapiens	WGATNNNATC	GATNNNATCW	ChIP-seq Contrino et al.(2012) Mv75	0.861	0.926
GATA1 M09115_2.00	Homo sapiens	NBKBNNNNNNVWGATAAVV	BBTTATCWBNNNNNNVMVN	Misc Kulakovskiy et al.(2013) GATA1_HUMAN.H11MO.0.A	0.861	0.926
GATA1 M09549_2.00	Homo sapiens	SWGATAAGVV	BBCTTATCWS	Misc Heinz et al.(2010) K562-GATA1_GSE18829	0.861	0.926
GATA1 M10577_2.00	Homo sapiens	SVNGATDBBN	NVVHATCNBS	Transfac Matys et al.(2006) V$GATA1_01	0.861	0.926
GATA1 M10578_2.00	Homo sapiens	NHVNHGATAVKVBN	NVBMBTATCDNBDN	Transfac Matys et al.(2006) V$GATA1_02	0.861	0.926
GATA1 M10579_2.00	Homo sapiens	RNSNDGATTRBNRN	NYNVYAATCHNSNY	Transfac Matys et al.(2006) V$GATA1_03	0.861	0.926
GATA1 M10580_2.00	Homo sapiens	DNVWGATARVNVN	NBNBYTATCWBNH	Transfac Matys et al.(2006) V$GATA1_04	0.861	0.926
GATA1 M10581_2.00	Homo sapiens	VMHGATAAVM	KBTTATCDKB	Transfac Matys et al.(2006) V$GATA1_05	0.861	0.926
GATA1 M10582_2.00	Homo sapiens	MNAGATAAVR	YBTTATCTNK	Transfac Matys et al.(2006) V$GATA1_06	0.861	0.926
GATA1 M10583_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA1_10	0.861	0.926
GATA1 M10584_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA1_Q6	0.861	0.926
GATA1 M04862_2.00	Homo sapiens	GATAABNNNVTTATC	GATAABNNNVTTATC	SELEX Yin et al.(2017) GATA1_eDBD_Methyl-HT-SELEX	0.861	0.926
pnr M03757_2.00	Drosophila melanogaster	NGATAAGATAASN	NSTTATCTTATCN	SELEX Nitta et al.(2015) pnr_1	0.856	0.868
pnr M03758_2.00	Drosophila melanogaster	NHGATAASV	BSTTATCDN	SELEX Nitta et al.(2015) pnr_2	0.856	0.868
pnr M06204_2.00	Drosophila melanogaster	BWGATAA	TTATCWV	B1H Zhu et al.(2011) pnr_SANGER_5_FBgn0003117	0.856	0.868
pnr M08204_2.00	Drosophila melanogaster	ANHNNBHGATAASSDNNB	VNNHSSTTATCDVNNDNT	ChIP-seq Contrino et al.(2012) Mf28	0.856	0.868
pnr M08418_2.00	Drosophila melanogaster	YATCGATWKBY	RVMWATCGATR	ChIP-chip Mathelier et al.(2014) MA0536.1	0.856	0.868
grn M03754_2.00	Drosophila melanogaster	HGATAASV	BSTTATCD	SELEX Nitta et al.(2015) grn_1	0.854	0.941
grn M03755_2.00	Drosophila melanogaster	NHGATAAGNNNCTTATCDN	NHGATAAGNNNCTTATCDN	SELEX Nitta et al.(2015) grn_2	0.854	0.941
grn M03756_2.00	Drosophila melanogaster	NHGATAACNNNGTTATCDN	NHGATAACNNNGTTATCDN	SELEX Nitta et al.(2015) grn_3	0.854	0.941
Gata1 M08127_2.00	Mus musculus	RNAGATAAGRV	BYCTTATCTNY	ChIP-seq Mathelier et al.(2014) MA0035.3	0.854	0.912
Gata1 M09124_2.00	Mus musculus	BKBNNNNNNVWGATAAVVV	BBBTTATCWBNNNNNNVMV	Misc Kulakovskiy et al.(2013) GATA1_MOUSE.H11MO.0.A	0.854	0.912
Gata4 M00799_2.00	Mus musculus	NHGATWDNN	NNHWATCDN	PBM Weirauch et al.(2013) pTH1049	0.851	0.912
GATA4 M03066_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA4_1	0.851	0.912
GATA4 M04875_2.00	Homo sapiens	NHGATAASVN	NBSTTATCDN	SELEX Yin et al.(2017) GATA4_eDBD_HT-SELEX	0.851	0.912
Gata4 M08126_2.00	Mus musculus	NDVAGATAAGR	YCTTATCTBHN	ChIP-seq Mathelier et al.(2014) MA0482.1	0.851	0.912
GATA4 M09117_2.00	Homo sapiens	NVWGATAAGR	YCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA4_HUMAN.H11MO.0.A	0.851	0.912
Gata4 M09123_2.00	Mus musculus	NVWGATAAGR	YCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA4_MOUSE.H11MO.0.A	0.851	0.912
Gata4 M09556_2.00	Mus musculus	NNWGATAASV	BSTTATCWNN	Misc Heinz et al.(2010) Heart-Gata4_GSE35151	0.851	0.912
GATA4 M10590_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA4_Q3	0.851	0.912
GATA4 M10591_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA4_Q5_01	0.851	0.912
GATA4 M04876_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA4_eDBD_Methyl-HT-SELEX	0.851	0.912
GATA5 M03065_2.00	Homo sapiens	HGATAAVV	BBTTATCD	SELEX Jolma et al.(2013) GATA5_1	0.851	0.853
GATA5 M04867_2.00	Homo sapiens	NHGATAASVN	NBSTTATCDN	SELEX Yin et al.(2017) GATA5_eDBD_HT-SELEX_1	0.851	0.853
GATA5 M04868_2.00	Homo sapiens	HGATAASRATCD	HGATYSTTATCD	SELEX Yin et al.(2017) GATA5_eDBD_HT-SELEX_2	0.851	0.853
GATA5 M04871_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA5_FL_HT-SELEX_1	0.851	0.853
GATA5 M04872_2.00	Homo sapiens	WGATAASRATCD	HGATYSTTATCW	SELEX Yin et al.(2017) GATA5_FL_HT-SELEX_2	0.851	0.853
GATA5 M04869_2.00	Homo sapiens	NWGATAASVN	NBSTTATCWN	SELEX Yin et al.(2017) GATA5_eDBD_Methyl-HT-SELEX_1	0.851	0.853
GATA5 M04870_2.00	Homo sapiens	WGATAAVRATCT	AGATYBTTATCW	SELEX Yin et al.(2017) GATA5_eDBD_Methyl-HT-SELEX_2	0.851	0.853
GATA5 M04873_2.00	Homo sapiens	NWGATAASRN	NYSTTATCWN	SELEX Yin et al.(2017) GATA5_FL_Methyl-HT-SELEX_1	0.851	0.853
GATA5 M04874_2.00	Homo sapiens	WGATAANRATCW	WGATYNTTATCW	SELEX Yin et al.(2017) GATA5_FL_Methyl-HT-SELEX_2	0.851	0.853
srp M03759_2.00	Drosophila melanogaster	NHGATAAVV	BBTTATCDN	SELEX Nitta et al.(2015) srp_1	0.851	0.824
srp M03760_2.00	Drosophila melanogaster	NHGATAABV	BVTTATCDN	SELEX Nitta et al.(2015) srp_2	0.851	0.824
srp M06205_2.00	Drosophila melanogaster	VTCWABCSATAV	BTAWSGVTWGAB	B1H Zhu et al.(2011) srp_FlyReg_FBgn0003507	0.851	0.824
srp M06206_2.00	Drosophila melanogaster	WGATAAGV	BCTTATCW	B1H Zhu et al.(2011) srp_SANGER_5_FBgn0003507	0.851	0.824
srp M09670_2.00	Drosophila melanogaster	KHGATARBV	BVYTATCDM	Misc Kulakovskiy et al.(2009) srp	0.851	0.824
Gata5 M00167_2.00	Mus musculus	NNHGAWWNN	NNWWTCDNN	PBM Badis et al.(2009) Gata5_3768	0.849	0.853
Gata5 M10598_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA5_Q4	0.849	0.853
Gata6 M00165_2.00	Mus musculus	NHGATARN	NYTATCDN	PBM Badis et al.(2009) Gata6_3769	0.842	0.838
GATA6 M04877_2.00	Homo sapiens	HGATAABVATCD	HGATBVTTATCD	SELEX Yin et al.(2017) GATA6_eDBD_HT-SELEX	0.842	0.838
GATA6 M08124_2.00	Homo sapiens	NNNAGATAAGRNN	NNYCTTATCTNNN	ChIP-seq Mathelier et al.(2014) MA1104.1	0.842	0.838
GATA6 M09118_2.00	Homo sapiens	NVWGATAAGRNNN	NNNYCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA6_HUMAN.H11MO.0.A	0.842	0.838
Gata6 M09120_2.00	Mus musculus	NVWGATAAGV	BCTTATCWBN	Misc Kulakovskiy et al.(2013) GATA6_MOUSE.H11MO.0.A	0.842	0.838
GATA6 M10592_2.00	Homo sapiens	NNHGATWDNN	NNHWATCDNN	Transfac Matys et al.(2006) V$GATA6_01	0.842	0.838
GATA6 M10593_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GATA6_Q5	0.842	0.838
GATA6 M04878_2.00	Homo sapiens	HGATAABRATCW	WGATYVTTATCD	SELEX Yin et al.(2017) GATA6_eDBD_Methyl-HT-SELEX	0.842	0.838
elt-1 M08206_2.00	Caenorhabditis elegans	GATWDNVATCT	AGATBNHWATC	ChIP-seq Contrino et al.(2012) Mw144	0.834	0.750
elt-1 M08207_2.00	Caenorhabditis elegans	TGATAASR	YSTTATCA	ChIP-seq Contrino et al.(2012) Mw145	0.834	0.750
For this family, TFs with SR scores > 0.802* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTBEP00000010507	GATA	183	217	CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQN
ENSTBEP00000010507	GATA	237	269	CANCQTTTTTLWRRNANGDPVCNACGLYYKLHN

Links
Other GATA family TFs
Other *Tupaia belangeri* TFs

570 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aquca_021_00051	Aquilegia coerulea	Aquca_021_00051	I	0.000
ANAC041	Arabidopsis lyrata	fgenesh2_kg.4__1354__AT2G33480.1	I	0.000
ANAC083	Arabidopsis lyrata	scaffold_601328.1	I	0.000
NAC083	Arabidopsis thaliana	AT5G13180	D	0.000
NAC041	Arabidopsis thaliana	AT2G33480	I	0.000
Bostr.23794s0753	Boechera stricta	Bostr.23794s0753	I	0.000
Bo2g011120	Brassica oleracea	Bo2g011120	I	0.000
Bo3g009040	Brassica oleracea	Bo3g009040	I	0.000
Bo4g043670	Brassica oleracea	Bo4g043670	I	0.000
Bo4g181990	Brassica oleracea	Bo4g181990	I	0.000
Bo9g168950	Brassica oleracea	Bo9g168950	I	0.000
Bra005492	Brassica rapa	Bra005492	I	0.000
Bra006186	Brassica rapa	Bra006186	I	0.000
Bra008849	Brassica rapa	Bra008849	I	0.000
Bra023395	Brassica rapa	Bra023395	I	0.000
PK12461.1	Cannabis sativa	PK12461.1	I	0.000
Cagra.0301s0034	Capsella grandiflora	Cagra.0301s0034	N	0.000
Carubv10023833m.g	Capsella rubella	Carubv10023833m.g	N	0.000
evm.TU.supercontig_4.138	Carica papaya	evm.TU.supercontig_4.138	N	0.000
Cla001517	Citrullus lanatus	Cla001517	I	0.000
Cla011059	Citrullus lanatus	Cla011059	I	0.000
Ciclev10032547m.g	Citrus clementina	Ciclev10032547m.g	I	0.000
orange1.1g030727m.g	Citrus sinensis	orange1.1g030727m.g	I	0.000
Cucsa.349370	Cucumis sativus	Cucsa.349370	I	0.000
Eucgr.B03537	Eucalyptus grandis	Eucgr.B03537	I	0.000
Thhalv10017152m.g	Eutrema salsugineum	Thhalv10017152m.g	I	0.000
Thhalv10014495m.g	Eutrema salsugineum	Thhalv10014495m.g	I	0.000
GLYMA08G47520	Glycine max	GLYMA08G47520	I	0.000
GLYMA18G53954	Glycine max	GLYMA18G53954	I	0.000
Gorai.012G125500	Gossypium raimondii	Gorai.012G125500	I	0.000
Gorai.005G195300	Gossypium raimondii	Gorai.005G195300	I	0.000
MDP0000130123	Malus domestica	MDP0000130123	I	0.000
MDP0000126517	Malus domestica	MDP0000126517	I	0.000
cassava12891.valid.m1	Manihot esculenta	cassava12891.valid.m1	I	0.000
cassava1138.valid.m1	Manihot esculenta	cassava1138.valid.m1	I	0.000
GSMUA_Achr10G11910_001	Musa acuminata	GSMUA_Achr10G11910_001	N	0.000
POPTR_0001s13380	Populus trichocarpa	POPTR_0001s13380	I	0.000
POPTR_0003s16490	Populus trichocarpa	POPTR_0003s16490	I	0.000
Pm007070	Prunus mume	Pm007070	I	0.000
PRUPE_ppa010222mg	Prunus persica	PRUPE_ppa010222mg	I	0.000
30128.m009035	Ricinus communis	30128.m009035	I	0.000
30147.m014441	Ricinus communis	30147.m014441	N	0.000
SapurV1A.0173s0020	Salix purpurea	SapurV1A.0173s0020	I	0.000
SapurV1A.0453s0210	Salix purpurea	SapurV1A.0453s0210	I	0.000
SapurV1A.0614s0190	Salix purpurea	SapurV1A.0614s0190	N	0.000
SapurV1A.1580s0010	Salix purpurea	SapurV1A.1580s0010	N	0.000
TCM_008477	Theobroma cacao	TCM_008477	I	0.000
ANAC083	Vitis vinifera	VIT_01s0146g00280	I	0.000

ENSTBEG00000012146 (Tupaia belangeri) GATA

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

570 Related TFs

ENSTBEG00000012146 **(Tupaia belangeri)
GATA**