GLOINDRAFT_349729 (Rhizophagus irregularis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GLOINDRAFT_349729 T193422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sub-1
M01235_2.00 		Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN		 PBM
Lambert et al.(2019)
pTH8614 		0.842 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA06708 GATA 406 441

Links

Other GATA family TFs
Other Rhizophagus irregularis TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_1442 Hordeum vulgare MLOC_1442 N
OLONG_026960 Oryza longistaminata OLONG_026960 N
OPUNC07G19470 Oryza punctata OPUNC07G19470 N
Si029796m.g Setaria italica Si029796m.g N
Sb02g038040 Sorghum bicolor Sb02g038040 N
Traes_2BS_FDABA21A7 Triticum aestivum Traes_2BS_FDABA21A7 N