GRMZM2G163200 (Zea mays)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GRMZM2G163200 T193567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.857 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.857 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.851 0.889
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.851 0.861
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.851 0.861
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.851 0.861
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.848 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.848 0.889
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.837 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G163200_P01 GATA 339 374
GRMZM2G163200_P02 GATA 339 374
GRMZM2G163200_P03 GATA 339 374
GRMZM2G163200_P04 GATA 339 374

Links

Other GATA family TFs
Other Zea mays TFs

610 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_167115 Amanita muscaria M378DRAFT_167115 N
BOTBODRAFT_178020 Botryobasidium botryosum BOTBODRAFT_178020 N
CERSUDRAFT_113294 Ceriporiopsis subvermispora CERSUDRAFT_113294 N
CC1G_01056 Coprinopsis cinerea CC1G_01056 N
DACRYDRAFT_68629 Dacryopinax sp DACRYDRAFT_68629 N
FIBRA_01643 Fibroporia radiculosa FIBRA_01643 N
FOMPIDRAFT_1038716 Fomitopsis pinicola FOMPIDRAFT_1038716 N
GALMADRAFT_251485 Galerina marginata GALMADRAFT_251485 N
GLOTRDRAFT_71665 Gloeophyllum trabeum GLOTRDRAFT_71665 N
GYMLUDRAFT_41756 Gymnopus luxurians GYMLUDRAFT_41756 N
M413DRAFT_15021 Hebeloma cylindrosporum M413DRAFT_15021 N
estExt_Genewise1Plus.C_20226 Heterobasidion annosum estExt_Genewise1Plus.C_20226 N
HETIRDRAFT_471598 Heterobasidion irregulare HETIRDRAFT_471598 N
JAAARDRAFT_173841 Jaapia argillacea JAAARDRAFT_173841 N
K443DRAFT_637386 Laccaria amethystina K443DRAFT_637386 N
LACBIDRAFT_307391 Laccaria bicolor LACBIDRAFT_307391 N
MVLG_04149 Microbotryum violaceum MVLG_04149 N
Moror_2743 Moniliophthora roreri Moror_2743 N
PAXRUDRAFT_130614 Paxillus rubicundulus PAXRUDRAFT_130614 N
PHACADRAFT_255745 Phanerochaete carnosa PHACADRAFT_255745 N
PHLGIDRAFT_29407 Phlebiopsis gigantea PHLGIDRAFT_29407 N
PILCRDRAFT_816234 Piloderma croceum PILCRDRAFT_816234 N
PISMIDRAFT_86154 Pisolithus microcarpus PISMIDRAFT_86154 N
M404DRAFT_122870 Pisolithus tinctorius M404DRAFT_122870 N
PLEOSDRAFT_1032392 Pleurotus ostreatus PLEOSDRAFT_1032392 N
PAN0_066c6560 Pseudozyma antarctica PAN0_066c6560 N
PaG_00967 Pseudozyma aphidis PaG_00967 N
PSEUBRA_SCAF13g01883 Pseudozyma brasiliensis PSEUBRA_SCAF13g01883 N
PHSY_007470 Pseudozyma hubeiensis PHSY_007470 N
V565_046060 Rhizoctonia solani V565_046060 N
SCLCIDRAFT_120465 Scleroderma citrinum SCLCIDRAFT_120465 N
M408DRAFT_325955 Serendipita vermifera M408DRAFT_325955 N
SERLA73DRAFT_59903 Serpula lacrymans SERLA73DRAFT_59903 N
M422DRAFT_62342 Sphaerobolus stellatus M422DRAFT_62342 N
M422DRAFT_168669 Sphaerobolus stellatus M422DRAFT_168669 N
sr15125 Sporisorium reilianum sr15125 N
M407DRAFT_29912 Tulasnella calospora M407DRAFT_29912 N
UHOR_06361 Ustilago hordei UHOR_06361 N
UM04235 Ustilago maydis UM04235 N