MLOC_15510 (Hordeum vulgare)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MLOC_15510 T194135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.856 0.917
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.856 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_15510.1 GATA 7 42

Links

Other GATA family TFs
Other Hordeum vulgare TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCMIDRAFT_96253 Bipolaris oryzae COCMIDRAFT_96253 N 0.000
EDP45324.1 Malassezia globosa EDP45324.1 N 0.000
MSY001_2707 Malassezia sympodialis MSY001_2707 N 0.000
MELLADRAFT_31636 Melampsora laricipopulina MELLADRAFT_31636 N 0.000
fgeneshMC_pg.4_#_663 Mucor circinelloides fgeneshMC_pg.4_#_663 N 0.000
fgeneshMC_pg.3_#_885 Mucor circinelloides fgeneshMC_pg.3_#_885 I 0.000
fgeneshMC_pg.1_#_1575 Mucor circinelloides fgeneshMC_pg.1_#_1575 N 0.000
estExt_fgeneshMC_pg.C_30057 Mucor circinelloides estExt_fgeneshMC_pg.C_30057 N 0.000
gw1.8.425.1 Phycomyces blakesleeanus gw1.8.425.1 N 0.000
fgeneshPB_pg.2__345 Phycomyces blakesleeanus fgeneshPB_pg.2__345 N 0.000
estExt_fgeneshPB_pg.C_440039 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_440039 N 0.000
PSEUBRA_SCAF2g02695 Pseudozyma brasiliensis PSEUBRA_SCAF2g02695 N 0.000
PHSY_003887 Pseudozyma hubeiensis PHSY_003887 N 0.000
RO3G_02446 Rhizopus oryzae RO3G_02446 N 0.000
RO3G_16953 Rhizopus oryzae RO3G_16953 N 0.000
RO3G_14274 Rhizopus oryzae RO3G_14274 N 0.000
RO3G_09726 Rhizopus oryzae RO3G_09726 N 0.000
RO3G_06899 Rhizopus oryzae RO3G_06899 N 0.000
RO3G_06395 Rhizopus oryzae RO3G_06395 I 0.000
RO3G_05037 Rhizopus oryzae RO3G_05037 N 0.000
RO3G_04904 Rhizopus oryzae RO3G_04904 N 0.000
sr12730 Sporisorium reilianum sr12730 N 0.000
TRV_07259 Trichophyton verrucosum TRV_07259 I 0.000
UHOR_02465 Ustilago hordei UHOR_02465 I 0.000