MLOC_5372 (Hordeum vulgare)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MLOC_5372 T194140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.853 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.853 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.812 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.812 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_5372.1 GATA 109 144

Links

Other GATA family TFs
Other Hordeum vulgare TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_080260 Acremonium chrysogenum ACRE_080260 N
COCC4DRAFT_153628 Bipolaris maydis COCC4DRAFT_153628 N
COCSADRAFT_222162 Bipolaris sorokiniana COCSADRAFT_222162 N
COCVIDRAFT_99703 Bipolaris victoriae COCVIDRAFT_99703 N
COCCADRAFT_88055 Bipolaris zeicola COCCADRAFT_88055 N
PVAR5_8873 Byssochlamys spectabilis PVAR5_8873 N
G647_05188 Cladophialophora carrionii G647_05188 N
FFUJ_08424 Fusarium fujikuroi FFUJ_08424 N
FOXG_08746 Fusarium oxysporum FOXG_08746 N
NechaG80102 Fusarium solani NechaG80102 N
NechaG80151 Fusarium solani NechaG80151 N
MGG_00096 Magnaporthe oryzae MGG_00096 N
fgenesh1_pg.sca_12_chr5_2_0000331 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000331 N
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N
OIDMADRAFT_45112 Oidiodendron maius OIDMADRAFT_45112 N
Pc13g06530 Penicillium chrysogenum Pc13g06530 N
PEX1_099950 Penicillium expansum PEX1_099950 N
PITC_065540 Penicillium italicum PITC_065540 N
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N
U727_00430311331 Penicillium solitum U727_00430311331 N
SNOG_01611 Phaeosphaeria nodorum SNOG_01611 N
V499_04467 Pseudogymnoascus pannorum V499_04467 N
V499_06431 Pseudogymnoascus pannorum V499_06431 N
PTT_10272 Pyrenophora teres PTT_10272 N
PTRG_03745 Pyrenophora triticirepentis PTRG_03745 N
SNOG_01611 Stagonospora nodorum SNOG_01611 N
TRIVIDRAFT_149245 Trichoderma virens TRIVIDRAFT_149245 N
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N
PV09_04169 Verruconis gallopava PV09_04169 N
VDAG_10012 Verticillium dahliae VDAG_10012 N