OBART06G26250 (Oryza barthii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OBART06G26250 T194364_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.867 1.000
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.857 0.861
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.851 0.833
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.851 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G26250.1 GATA 257 294

Links

Other GATA family TFs
Other Oryza barthii TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_16897 Ancylostoma caninum ANCCAN_16897 N
ANCCEY_10921 Ancylostoma ceylanicum ANCCEY_10921 N
ACOC_0000225601 Angiostrongylus costaricensis ACOC_0000225601 N
DICVIV_08156 Dictyocaulus viviparus DICVIV_08156 N
HCOI01518500 Haemonchus contortus HCOI01518500 N
HPLM_0001875601 Haemonchus placei HPLM_0001875601 N
HPBE_0000100701 Heligmosomoides bakeri HPBE_0000100701 N
TELCIR_19453 Teladorsagia circumcincta TELCIR_19453 N