CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFL1_03839
(
Pseudozyma flocculosa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PFL1_03839
T194691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.845
0.861
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ28535
GATA
862
897
CTDCGRVDSPEWRKGPLGPKTLCNACGLRWAKKIKR
Links
Other
GATA
family TFs
Other
Pseudozyma flocculosa
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_079170
Acremonium chrysogenum
ACRE_079170
N
CFIO01_10935
Colletotrichum fioriniae
CFIO01_10935
N
GLRG_04054
Colletotrichum graminicola
GLRG_04054
N
CH063_07408
Colletotrichum higginsianum
CH063_07408
N
Cob_08103
Colletotrichum orbiculare
Cob_08103
N
CSUB01_03837
Colletotrichum sublineola
CSUB01_03837
N
FFUJ_01364
Fusarium fujikuroi
FFUJ_01364
N
FGRRES_01172
Fusarium graminearum
FGRRES_01172
N
FOXG_00219
Fusarium oxysporum
FOXG_00219
N
FPSE_02603
Fusarium pseudograminearum
FPSE_02603
N
NechaG89979
Fusarium solani
NechaG89979
N
FVEG_01299
Fusarium verticillioides
FVEG_01299
N
MAC_04201
Metarhizium acridum
MAC_04201
N
MANI_024672
Metarhizium anisopliae
MANI_024672
N
MBR_03632
Metarhizium brunneum
MBR_03632
N
MGU_04822
Metarhizium guizhouense
MGU_04822
N
MAJ_02155
Metarhizium majus
MAJ_02155
N
X797_003689
Metarhizium robertsii
X797_003689
N
fgenesh1_pm.sca_1_chr1_3_0000112
Nectria haematococca
fgenesh1_pm.sca_1_chr1_3_0000112
N
NFIA_003270
Neosartorya fischeri
CADNFIAG00000089
N
OCS_04252
Ophiocordyceps sinensis
OCS_04252
N
S40288_08147
Stachybotrys chartarum
S40288_08147
N
S40285_00886
Stachybotrys chlorohalonata
S40285_00886
N
VHEMI06418
Torrubiella hemipterigena
VHEMI06418
N
TRIATDRAFT_221642
Trichoderma atroviride
TRIATDRAFT_221642
N
TRIREDRAFT_78895
Trichoderma reesei
TRIREDRAFT_78895
N
TRIVIDRAFT_35417
Trichoderma virens
TRIVIDRAFT_35417
N
UV8b_5696
Ustilaginoidea virens
UV8b_5696
N