PGSC0003DMG400004624 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400004624 T194704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.861
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.861
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400011778 GATA 20 55
PGSC0003DMT400011779 GATA 33 68
PGSC0003DMT400011780 GATA 1 18

Links

Other GATA family TFs
Other Solanum tuberosum TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01584 Aspergillus nidulans CADANIAG00008217 N 0.000
EURHEDRAFT_415639 Aspergillus ruber EURHEDRAFT_415639 N 0.000
ATEG_06092 Aspergillus terreus CADATEAG00000839 N 0.000
COCC4DRAFT_130965 Bipolaris maydis COCC4DRAFT_130965 N 0.000
COCMIDRAFT_30122 Bipolaris oryzae COCMIDRAFT_30122 N 0.000
COCSADRAFT_34052 Bipolaris sorokiniana COCSADRAFT_34052 N 0.000
COCVIDRAFT_20793 Bipolaris victoriae COCVIDRAFT_20793 N 0.000
COCCADRAFT_40088 Bipolaris zeicola COCCADRAFT_40088 N 0.000
A1O1_00464 Capronia coronata A1O1_00464 N 0.000
PV04_07764 Capronia semiimmersa PV04_07764 N 0.000
estExt_Genewise1Plus.C_70733 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_70733 N 0.000
CFIO01_01654 Colletotrichum fioriniae CFIO01_01654 N 0.000
HMPREF1120_00198 Exophiala dermatitidis HMPREF1120_00198 N 0.000
HMPREF1120_05596 Exophiala dermatitidis HMPREF1120_05596 I 0.000
PV06_07837 Exophiala oligosperma PV06_07837 N 0.000
PV06_11257 Exophiala oligosperma PV06_11257 N 0.000
PV06_11661 Exophiala oligosperma PV06_11661 N 0.000
PV11_03278 Exophiala sideris PV11_03278 N 0.000
PV08_03348 Exophiala spinifera PV08_03348 N 0.000
PV05_04423 Exophiala xenobiotica PV05_04423 N 0.000
NechaG88155 Fusarium solani NechaG88155 N 0.000
NechaG86758 Fusarium solani NechaG86758 N 0.000
KUCA_T00003114001 Kuraishia capsulata KUCA_T00003114001 N 0.000
KUCA_T00005495001 Kuraishia capsulata KUCA_T00005495001 N 0.000
KUCA_T00004747001 Kuraishia capsulata KUCA_T00004747001 N 0.000
KUCA_T00003996001 Kuraishia capsulata KUCA_T00003996001 N 0.000
KUCA_T00003984001 Kuraishia capsulata KUCA_T00003984001 N 0.000
KUCA_T00000009001 Kuraishia capsulata KUCA_T00000009001 N 0.000
LEMA_P012820.1 Leptosphaeria maculans LEMA_P012820.1 N 0.000
MGG_14816 Magnaporthe oryzae MGG_14816 N 0.000
MAC_06969 Metarhizium acridum MAC_06969 N 0.000
MBR_08966 Metarhizium brunneum MBR_08966 N 0.000
MGU_09044 Metarhizium guizhouense MGU_09044 N 0.000
MAJ_08159 Metarhizium majus MAJ_08159 N 0.000
X797_009392 Metarhizium robertsii X797_009392 N 0.000
fgenesh1_pg.sca_28_chr13_5_0000057 Nectria haematococca fgenesh1_pg.sca_28_chr13_5_0000057 N 0.000
fgenesh1_pg.sca_32_chr11_3_0000153 Nectria haematococca fgenesh1_pg.sca_32_chr11_3_0000153 N 0.000
Pc13g03330 Penicillium chrysogenum Pc13g03330 N 0.000
PEX1_062920 Penicillium expansum PEX1_062920 N 0.000
PCH_Pc13g03330 Penicillium rubens PCH_Pc13g03330 N 0.000
U727_00432581551 Penicillium solitum U727_00432581551 N 0.000
SNOG_11030 Phaeosphaeria nodorum SNOG_11030 N 0.000
PTT_06689 Pyrenophora teres PTT_06689 N 0.000
PTRG_10883 Pyrenophora triticirepentis PTRG_10883 N 0.000
SETTUDRAFT_92771 Setosphaeria turcica SETTUDRAFT_92771 N 0.000
SNOG_11030 Stagonospora nodorum SNOG_11030 N 0.000