CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400026248
(
Solanum tuberosum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PGSC0003DMG400026248
T194719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400067506
GATA
7
42
CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTL
Links
Other
GATA
family TFs
Other
Solanum tuberosum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_12786
Cicer arietinum
Ca_12786
N
0.867
MTR_4g099410
Medicago truncatula
MTR_4g099410
N
0.827
MTR_5g013370
Medicago truncatula
MTR_5g013370
N
0.867
Solyc06g060940.1
Solanum lycopersicum
Solyc06g060940.1
N
0.867
Solyc08g007190.2
Solanum lycopersicum
Solyc08g007190.2
N
0.867
Solyc08g077960.2
Solanum lycopersicum
Solyc08g077960.2
N
0.867
PGSC0003DMG400020491
Solanum tuberosum
PGSC0003DMG400020491
N
0.867
PGSC0003DMG400026578
Solanum tuberosum
PGSC0003DMG400026578
N
0.867