PGSC0003DMG400029144 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400029144 T194723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.857 0.917
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.857 0.917
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.856 0.972
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.856 0.972
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.856 0.972
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.851 0.944
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.843 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.843 0.806
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.838 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400074935 GATA 255 290

Links

Other GATA family TFs
Other Solanum tuberosum TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00083g513 Arthrobotrys oligospora AOL_s00083g513 N
fgenesh1_pg.00866_#_396 Aspergillus carbonarius fgenesh1_pg.00866_#_396 N
ACLA_039280 Aspergillus clavatus CADACLAG00003549 N
CADAFLAG00002502 Aspergillus flavus CADAFLAG00002502 N
ANIA_02905 Aspergillus nidulans CADANIAG00010184 N
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N
CADAORAG00001291 Aspergillus oryzae CADAORAG00001291 N
EURHEDRAFT_403202 Aspergillus ruber EURHEDRAFT_403202 N
ATEG_04673 Aspergillus terreus CADATEAG00009625 N
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N
H072_9133 Dactylellina haptotyla H072_9133 N
A1O9_00937 Exophiala aquamarina A1O9_00937 N
MBM_02991 Marssonina brunnea MBM_02991 N
NFIA_065920 Neosartorya fischeri CADNFIAG00005868 N
OIDMADRAFT_162843 Oidiodendron maius OIDMADRAFT_162843 N
SNOG_12221 Phaeosphaeria nodorum SNOG_12221 N
PredSwiss_ASS2010_3776.1 Pneumocystis carinii PredSwiss_ASS2010_3776.1 N
PredSwiss_CON2738.2 Pneumocystis carinii PredSwiss_CON2738.2 N
PredSwiss_CON3214.2 Pneumocystis carinii PredSwiss_CON3214.2 N
PredSwiss_CON858.1 Pneumocystis carinii PredSwiss_CON858.1 N
PNEG_03153 Pneumocystis murina PNEG_03153 N
SNOG_12221 Stagonospora nodorum SNOG_12221 N
THITE_2067650 Thielavia terrestris THITE_2067650 N
WALSEDRAFT_66738 Wallemia sebi WALSEDRAFT_66738 N