SELMODRAFT_29502 (Selaginella moellendorffii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SELMODRAFT_29502 T195159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.816 0.923
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.813 0.923
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.813 0.923
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.812 0.885
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.802 0.885
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.802 0.885
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.802 0.885
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.802 0.885
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ34037 GATA 1 26

Links

Other GATA family TFs
Other Selaginella moellendorffii TFs

312 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000013606 Astyanax mexicanus ENSAMXG00000013606 N
BGLB000541 Biomphalaria glabrata BGLB000541 I
CapteG146844 Capitella teleta CapteG146844 N
ENSCHOG00000011802 Choloepus hoffmanni ENSCHOG00000011802 N
KGM_16549 Danaus plexippus KGM_16549 N
arid1ab Danio rerio ENSDARG00000101891 N
ENSGMOG00000001024 Gadus morhua ENSGMOG00000001024 N
arid1ab Gasterosteus aculeatus ENSGACG00000007627 N
Gfo_R011571 Geospiza fortis Gfo_R011571 N
HMEL004935 Heliconius melpomene HMEL004935 N
HelroG69268 Helobdella robusta HelroG69268 N
ENSLOCG00000003798 Lepisosteus oculatus ENSLOCG00000003798 N
MCINX004970 Melitaea cinxia MCINX004970 N
ENSONIG00000007618 Oreochromis niloticus ENSONIG00000007618 N
ENSOANG00000030531 Ornithorhynchus anatinus ENSOANG00000030531 N
estExt_fgeneshPB_pg.C_11088 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_11088 N
ENSPFOG00000002208 Poecilia formosa ENSPFOG00000002208 N
ENSPVAG00000010595 Pteropus vampyrus ENSPVAG00000010595 N
RSKR_0000997600 Rhabditophanes kr3021 RSKR_0000997600 N
L596_g18182 Steinernema carpocapsae L596_g18182 N
L893_g27549 Steinernema glaseri L893_g27549 N
L898_g5090 Steinernema monticolum L898_g5090 N
ENSSSCG00000028486 Sus scrofa ENSSSCG00000028486 N
arid1ab Takifugu rubripes ENSTRUG00000012325 N
ENSTSYG00000011521 Tarsius syrichta ENSTSYG00000011521 N
ENSTNIG00000017481 Tetraodon nigroviridis ENSTNIG00000017481 N
arid1aa Tetraodon nigroviridis ENSTNIG00000009659 N
XP_002934686 Xenopus tropicalis XP_002934686 N
ENSXMAG00000010716 Xiphophorus maculatus ENSXMAG00000010716 N