CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SKUD_160603
(
Saccharomyces kudriavzevii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SKUD_160603
T195239_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DAL80
M00052_2.00
Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN
PBM
Badis et al.(2008)
DAL80_2083
0.867
1.000
DAL80
M07481_2.00
Saccharomyces cerevisiae
YGATAAG
CTTATCR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1
0.867
1.000
DAL80
M08564_2.00
Saccharomyces cerevisiae
VNMGATAD
HTATCKNB
Misc
DeBoer et al.(2011)
YKR034W_1355
0.867
1.000
GZF3
M00051_2.00
Saccharomyces cerevisiae
HGATAAGN
NCTTATCD
PBM
Badis et al.(2008)
GZF3_2167
0.862
0.800
GZF3
M01548_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gzf3
0.862
0.800
GZF3
M07480_2.00
Saccharomyces cerevisiae
HGATAASN
NSTTATCD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1
0.862
0.800
GZF3
M08562_2.00
Saccharomyces cerevisiae
GATAAG
CTTATC
Misc
DeBoer et al.(2011)
YJL110C_593
0.862
0.800
GAT1
M00049_2.00
Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN
PBM
Badis et al.(2008)
GAT1_2166
0.837
0.686
GAT1
M01546_2.00
Saccharomyces cerevisiae
NNGATWNN
NNWATCNN
PBM
Zhu et al.(2009)
Gat1
0.837
0.686
GAT1
M07478_2.00
Saccharomyces cerevisiae
NHGATAAG
CTTATCDN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1
0.837
0.686
GAT1
M08560_2.00
Saccharomyces cerevisiae
WKTGATWW
WWATCAMW
Misc
DeBoer et al.(2011)
YFL021W_962
0.837
0.686
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJT44851
GATA
31
65
CQNCFTVKTPLWRRDEHGTVLCNACGLFLKLHGEP
Links
Other
GATA
family TFs
Other
Saccharomyces kudriavzevii
TFs
376 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CNH00430
Cryptococcus neoformans
CNH00430
N
A1Q1_02471
Trichosporon asahii
A1Q1_02471
N