Solyc05g054400.2 (Solanum lycopersicum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Solyc05g054400.2 T195303_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.861
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.861
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g054400.2.1 GATA 32 67

Links

Other GATA family TFs
Other Solanum lycopersicum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_01120 Arthroderma benhamiae ARB_01120 N
MCYG_02260 Arthroderma otae MCYG_02260 N
fgenesh1_pm.00771_#_78 Aspergillus carbonarius fgenesh1_pm.00771_#_78 N
ACLA_007650 Aspergillus clavatus CADACLAG00000450 N
CADAFLAG00000474 Aspergillus flavus CADAFLAG00000474 N
AFUA_7G05960 Aspergillus fumigatus CADAFUAG00009660 N
CADANGAG00005435 Aspergillus niger CADANGAG00005435 N
CADAORAG00002457 Aspergillus oryzae CADAORAG00002457 N
EURHEDRAFT_512897 Aspergillus ruber EURHEDRAFT_512897 N
COCC4DRAFT_202082 Bipolaris maydis COCC4DRAFT_202082 N
COCMIDRAFT_98420 Bipolaris oryzae COCMIDRAFT_98420 N
COCSADRAFT_314350 Bipolaris sorokiniana COCSADRAFT_314350 N
COCVIDRAFT_111354 Bipolaris victoriae COCVIDRAFT_111354 N
COCCADRAFT_88010 Bipolaris zeicola COCCADRAFT_88010 N
BDDG_08162 Blastomyces dermatitidis BDDG_08162 N
PVAR5_4548 Byssochlamys spectabilis PVAR5_4548 N
A1O1_02509 Capronia coronata A1O1_02509 N
A1O1_00801 Capronia coronata A1O1_00801 I
A1O3_00914 Capronia epimyces A1O3_00914 N
PV04_05279 Capronia semiimmersa PV04_05279 I
PV04_08823 Capronia semiimmersa PV04_08823 N
Z519_01916 Cladophialophora bantiana Z519_01916 N
G647_04666 Cladophialophora carrionii G647_04666 I
G647_07244 Cladophialophora carrionii G647_07244 N
PV07_00882 Cladophialophora immunda PV07_00882 N
A1O5_01498 Cladophialophora psammophila A1O5_01498 N
A1O7_08287 Cladophialophora yegresii A1O7_08287 N
A1O7_04026 Cladophialophora yegresii A1O7_04026 I
CIMG_08163 Coccidioides immitis CIMG_08163 N
CPC735_021860 Coccidioides posadasii CPC735_021860 N
estExt_Genewise1Plus.C_230145 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_230145 N
HMPREF1541_03654 Cyphellophora europaea HMPREF1541_03654 N
HMPREF1120_02238 Exophiala dermatitidis HMPREF1120_02238 N
HMPREF1120_06404 Exophiala dermatitidis HMPREF1120_06404 N
PV10_04925 Exophiala mesophila PV10_04925 N
PV10_00514 Exophiala mesophila PV10_00514 I
PV06_09822 Exophiala oligosperma PV06_09822 N
PV11_02484 Exophiala sideris PV11_02484 N
PV08_08880 Exophiala spinifera PV08_08880 N
PV05_01304 Exophiala xenobiotica PV05_01304 N
PV05_00997 Exophiala xenobiotica PV05_00997 N
Z517_05164 Fonsecaea pedrosoi Z517_05164 N
Z517_11712 Fonsecaea pedrosoi Z517_11712 I
HCBG_04319 Histoplasma capsulatum HCBG_04319 N
LEMA_P059350.1 Leptosphaeria maculans LEMA_P059350.1 N
MPH_07157 Macrophomina phaseolina MPH_07157 N
MCYG_02260 Microsporum canis MCYG_02260 N
MGYG_07575 Microsporum gypseum MGYG_07575 N
NFIA_027200 Neosartorya fischeri CADNFIAG00002534 N
F503_05039 Ophiostoma piceae uamh F503_05039 N
PABG_00768 Paracoccidioides brasiliensis PABG_00768 N
PAAG_03715 Paracoccidioides sp lutzii PAAG_03715 N
Pc20g01360 Penicillium chrysogenum Pc20g01360 N
PDIP_22920 Penicillium digitatum PDIP_22920 N
PEX1_025390 Penicillium expansum PEX1_025390 N
PITC_029080 Penicillium italicum PITC_029080 N
PMAA_049200 Penicillium marneffei PMAA_049200 N
PDE_02184 Penicillium oxalicum PDE_02184 N
PCH_Pc20g01360 Penicillium rubens PCH_Pc20g01360 N
U727_00431380241 Penicillium solitum U727_00431380241 N
SNOG_12578 Phaeosphaeria nodorum SNOG_12578 N
GMDG_04017 Pseudogymnoascus destructans GMDG_04017 I
V499_02646 Pseudogymnoascus pannorum V499_02646 I
PTT_14634 Pyrenophora teres PTT_14634 N
Z518_10852 Rhinocladiella mackenziei Z518_10852 N
Z518_10184 Rhinocladiella mackenziei Z518_10184 I
SETTUDRAFT_164235 Setosphaeria turcica SETTUDRAFT_164235 N
SNOG_12578 Stagonospora nodorum SNOG_12578 N
PMAA_049200 Talaromyces marneffei PMAA_049200 N
TEQG_07260 Trichophyton equinum TEQG_07260 N
H101_04104 Trichophyton interdigitale H101_04104 N
H102_03320 Trichophyton rubrum H102_03320 N
H105_03339 Trichophyton soudanense H105_03339 N
TESG_03991 Trichophyton tonsurans TESG_03991 N
TRV_02239 Trichophyton verrucosum TRV_02239 N
UREG_02425 Uncinocarpus reesii UREG_02425 N
PV09_03074 Verruconis gallopava PV09_03074 N