CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BL_F258582BB
(
Triticum aestivum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Traes_5BL_F258582BB
T195479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN
NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.807
0.778
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.807
0.778
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.807
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BL_F258582BB.1
GATA
27
62
CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRRE
Links
Other
GATA
family TFs
Other
Triticum aestivum
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_090530
Acremonium chrysogenum
ACRE_090530
N
0.000
BBA_05678
Beauveria bassiana
BBA_05678
N
0.000
BBA_09096
Beauveria bassiana
BBA_09096
N
0.000
Bcin08g05570
Botrytis cinerea
Bcin08g05570
N
0.000
CHGG_06117
Chaetomium globosum
CHGG_06117
N
0.000
CPUR_04593
Claviceps purpurea
CPUR_04593
N
0.000
CFIO01_05100
Colletotrichum fioriniae
CFIO01_05100
N
0.000
CGGC5_7812
Colletotrichum gloeosporioides
CGGC5_7812
N
0.000
GLRG_02657
Colletotrichum graminicola
GLRG_02657
N
0.000
CH063_07963
Colletotrichum higginsianum
CH063_07963
N
0.000
Cob_02607
Colletotrichum orbiculare
Cob_02607
N
0.000
CSUB01_00007
Colletotrichum sublineola
CSUB01_00007
N
0.000
CCM_07309
Cordyceps militaris
CCM_07309
N
0.000
estExt_Genewise1Plus.C_110189
Cryphonectria parasitica
estExt_Genewise1Plus.C_110189
N
0.000
FFUJ_05577
Fusarium fujikuroi
FFUJ_05577
N
0.000
FGRRES_16399
Fusarium graminearum
FGRRES_16399
N
0.000
FPSE_05593
Fusarium pseudograminearum
FPSE_05593
N
0.000
NechaG92211
Fusarium solani
NechaG92211
N
0.000
FVEG_13110
Fusarium verticillioides
FVEG_13110
N
0.000
GGTG_04996
Gaeumannomyces graminis
GGTG_04996
N
0.000
MGG_09002
Magnaporthe oryzae
MGG_09002
N
0.000
MAC_07722
Metarhizium acridum
MAC_07722
N
0.000
MAC_08257
Metarhizium acridum
MAC_08257
N
0.000
MAM_07708
Metarhizium album
MAM_07708
N
0.000
MANI_114498
Metarhizium anisopliae
MANI_114498
N
0.000
MGU_06147
Metarhizium guizhouense
MGU_06147
N
0.000
MAJ_06521
Metarhizium majus
MAJ_06521
N
0.000
X797_007680
Metarhizium robertsii
X797_007680
N
0.000
MYCTH_2089183
Myceliophthora thermophila
MYCTH_2089183
N
0.000
fgenesh1_pm.sca_54_chr3_4_0000024
Nectria haematococca
fgenesh1_pm.sca_54_chr3_4_0000024
N
0.000
vad-6
Neurospora crassa
NCU09205
N
0.000
estExt_Genewise1Plus.C_70270
Neurospora discreta
estExt_Genewise1Plus.C_70270
N
0.000
NEUTE1DRAFT_125863
Neurospora tetrasperma
NEUTE1DRAFT_125863
N
0.000
OIDMADRAFT_152191
Oidiodendron maius
OIDMADRAFT_152191
N
0.000
PFICI_13325
Pestalotiopsis fici
PFICI_13325
N
0.000
PODANS_1_15900
Podospora anserina
PODANS_1_15900
N
0.000
SAPIO_CDS4869
Scedosporium apiospermum
SAPIO_CDS4869
N
0.000
SBOR_4456
Sclerotinia borealis
SBOR_4456
N
0.000
SMAC_00182
Sordaria macrospora
SMAC_00182
N
0.000
S40288_07943
Stachybotrys chartarum
S40288_07943
N
0.000
S40288_09581
Stachybotrys chartarum
S40288_09581
N
0.000
S40285_05622
Stachybotrys chlorohalonata
S40285_05622
N
0.000
THITE_2112671
Thielavia terrestris
THITE_2112671
N
0.000
VHEMI05419
Torrubiella hemipterigena
VHEMI05419
N
0.000
TRIATDRAFT_293894
Trichoderma atroviride
TRIATDRAFT_293894
N
0.000
TRIREDRAFT_76705
Trichoderma reesei
TRIREDRAFT_76705
N
0.000
TRIVIDRAFT_113690
Trichoderma virens
TRIVIDRAFT_113690
N
0.000
UV8b_3402
Ustilaginoidea virens
UV8b_3402
N
0.000
VDBG_01884
Verticillium albo atrum
VDBG_01884
N
0.000
VDBG_01884
Verticillium alfalfae
VDBG_01884
N
0.000