CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10005054
(
Chelonia mydas
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Cmyd_10005054
T195892_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10005054
GATA
418
452
CAQCRTDFTPHWKQEKNGKILCEQCMTSNQKKALK
Links
Other
GATA
family TFs
Other
Chelonia mydas
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pag1_scaffold_178-fgenesh-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_178-fgenesh-gene-0.1
N
0.000
maker-pag1_scaffold_178-fgenesh-gene-0.2
Pythium aphanidermatum
maker-pag1_scaffold_178-fgenesh-gene-0.2
N
0.000
maker-par_contig_2454-snap-gene-0.3
Pythium arrhenomanes
maker-par_contig_2454-snap-gene-0.3
N
0.000
maker-par_contig_5863-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_5863-snap-gene-0.1
N
0.000
maker-par_contig_6675-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6675-fgenesh-gene-0.0
N
0.000
maker-pir_contig_1091-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1091-fgenesh-gene-0.2
N
0.000
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I
0.000
maker-pir_contig_2120-snap-gene-0.3
Pythium irregulare
maker-pir_contig_2120-snap-gene-0.3
N
0.000
maker-pir_contig_4877-snap-gene-0.1
Pythium irregulare
maker-pir_contig_4877-snap-gene-0.1
N
0.000
PYU1_G006427
Pythium ultimum
PYU1_G006427
N
0.000
PYU1_G006442
Pythium ultimum
PYU1_G006442
N
0.000
PYU1_G006443
Pythium ultimum
PYU1_G006443
N
0.000