CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28035.m000366
(
Ricinus communis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
28035.m000366
T195987_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28035.m000366
GATA
111
148
CTNYNCNTNDTPMWRKGPLGPKTLCNACGIKYRKEVEK
Links
Other
GATA
family TFs
Other
Ricinus communis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g076170
Brassica oleracea
Bo3g076170
N
0.828
Bra001801
Brassica rapa
Bra001801
N
0.828
Ciclev10017490m.g
Citrus clementina
Ciclev10017490m.g
N
0.847
orange1.1g047722m.g
Citrus sinensis
orange1.1g047722m.g
N
0.851
Thhalv10022088m.g
Eutrema salsugineum
Thhalv10022088m.g
N
0.828
Gorai.009G070200
Gossypium raimondii
Gorai.009G070200
N
0.851
POPTR_0003s21770
Populus trichocarpa
POPTR_0003s21770
N
0.830
TCM_040387
Theobroma cacao
TCM_040387
N
0.865