Aquca_053_00062 (Aquilegia coerulea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Aquca_053_00062 T196382_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.944
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_053_00062.1 GATA 7 42
Aquca_053_00062.2 GATA 7 42

Links

Other GATA family TFs
Other Aquilegia coerulea TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_29279 Aegilops tauschii F775_29279 N
BRADI2G23710 Brachypodium distachyon BRADI2G23710 N
GLYMA18G07250 Glycine max GLYMA18G07250 I
MLOC_70659 Hordeum vulgare MLOC_70659 N
LPERR01G32290 Leersia perrieri LPERR01G32290 N
LPERR05G14660 Leersia perrieri LPERR05G14660 N
OBART01G37590 Oryza barthii OBART01G37590 N
OBART01G37610 Oryza barthii OBART01G37610 N
OB01G46330 Oryza brachyantha OB01G46330 N
OB05G26340 Oryza brachyantha OB05G26340 N
ORGLA05G0161500 Oryza glaberrima ORGLA05G0161500 N
ORGLA01G0314400 Oryza glaberrima ORGLA01G0314400 N
OGLUM05G19710 Oryza glumaepatula OGLUM05G19710 N
OGLUM01G41520 Oryza glumaepatula OGLUM01G41520 N
BGIOSGA000472 Oryza indica BGIOSGA000472 N
BGIOSGA017944 Oryza indica BGIOSGA017944 N
OLONG_007151 Oryza longistaminata OLONG_007151 N
OMERI05G16220 Oryza meridionalis OMERI05G16220 N
OMERI01G34580 Oryza meridionalis OMERI01G34580 N
ONIVA01G42500 Oryza nivara ONIVA01G42500 N
ONIVA05G19570 Oryza nivara ONIVA05G19570 N
OPUNC01G36480 Oryza punctata OPUNC01G36480 N
OPUNC05G16320 Oryza punctata OPUNC05G16320 N
ORUFI01G40950 Oryza rufipogon ORUFI01G40950 N
ORUFI05G19800 Oryza rufipogon ORUFI05G19800 N
OS01G0853700 Oryza sativa OS01G0853700 N
OS05G0449900 Oryza sativa OS05G0449900 N
Pavir.J04337 Panicum virgatum Pavir.J04337 N
Pavir.J16113 Panicum virgatum Pavir.J16113 I
Si002423m.g Setaria italica Si002423m.g N
Si022816m.g Setaria italica Si022816m.g N
Sb03g040160 Sorghum bicolor Sb03g040160 N
Sb09g022060 Sorghum bicolor Sb09g022060 N
TRAES3BF018800030CFD_g Triticum aestivum TRAES3BF018800030CFD_g N
GRMZM2G056986 Zea mays GRMZM2G056986 N
GRMZM2G125522 Zea mays GRMZM2G125522 N