Cagra.3356s0048 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.3356s0048 T196433_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 1.000
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3356s0048.1.p GATA 7 42

Links

Other GATA family TFs
Other Capsella grandiflora TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000050069-D4 Bos grunniens ENSBTAP00000050069-D4 I
ZNF664 Bos taurus ENSBTAG00000039023 I
ZNF664 Callithrix jacchus ENSCJAG00000020528 I
ZNF664 Canis familiaris ENSCAFG00000006994 I
ENSCPOG00000014434 Cavia porcellus ENSCPOG00000014434 I
ENSCSAG00000018951 Chlorocebus sabaeus ENSCSAG00000018951 I
ZNF664 Choloepus hoffmanni ENSCHOG00000007980 I
ZNF664 Dasypus novemcinctus ENSDNOG00000049308 I
ENSDORG00000002347 Dipodomys ordii ENSDORG00000002347 I
ZNF664 Echinops telfairi ENSETEG00000002897 I
ZNF664 Erinaceus europaeus ENSEEUG00000012333 I
ZNF664 Felis catus ENSFCAG00000011064 I
ZNF664 Gorilla gorilla ENSGGOG00000011984 I
ZNF664 Homo sapiens ENSG00000179195 I
ENSSTOG00000005576 Ictidomys tridecemlineatus ENSSTOG00000005576 I
ZNF664 Loxodonta africana ENSLAFG00000004183 I
ENSP00000337320 Macaca fascicularis ENSP00000337320 I
ZNF664 Macaca mulatta ENSMMUG00000009213 I
Zfp664 Mus musculus ENSMUSG00000079215 D
Myotis_brandtii_ZNF664_10013049 Myotis brandtii Myotis_brandtii_ZNF664_10013049 I
ZNF664 Myotis lucifugus ENSMLUG00000001021 I
ENSNLEG00000002332 Nomascus leucogenys ENSNLEG00000002332 I
ZNF664 Ochotona princeps ENSOPRG00000012643 I
ZNF664 Otolemur garnettii ENSOGAG00000008743 I
ENSOARG00000004564 Ovis aries ENSOARG00000004564 I
ZNF664 Pan troglodytes ENSPTRG00000029491 I
ENSPANG00000017820 Papio anubis ENSPANG00000017820 I
ENSPPYG00000005169 Pongo abelii ENSPPYG00000005169 I
ZNF664 Pteropus vampyrus ENSPVAG00000001588 I
LOC102556092 Rattus norvegicus ENSRNOG00000021705 I
ENSSSCG00000009763 Sus scrofa ENSSSCG00000009763 I
ZNF664 Tursiops truncatus ENSTTRG00000002993 I
ZNF664 Vicugna pacos ENSVPAG00000007679 I