Cagra.3675s0017 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.3675s0017 T196435_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3675s0017.1.p GATA 7 42

Links

Other GATA family TFs
Other Capsella grandiflora TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006001 Ailuropoda melanoleuca ENSAMEG00000006001 N 0.000
ENSBTAP00000044076-D1 Bos grunniens ENSBTAP00000044076-D1 N 0.000
TERF1 Bos taurus ENSBTAG00000032982 N 0.000
TERF1 Callithrix jacchus ENSCJAG00000007714 N 0.000
TERF1 Canis familiaris ENSCAFG00000007975 N 0.000
TERF1 Cavia porcellus ENSCPOG00000009638 N 0.000
ENSCSAG00000013598 Chlorocebus sabaeus ENSCSAG00000013598 N 0.000
TERF1 Choloepus hoffmanni ENSCHOG00000002407 N 0.000
ENSDNOG00000011332 Dasypus novemcinctus ENSDNOG00000011332 N 0.000
Terf1 Dipodomys ordii ENSDORG00000003657 N 0.000
TERF1 Equus caballus ENSECAG00000011894 N 0.000
TERF1 Erinaceus europaeus ENSEEUG00000008963 N 0.000
TERF1 Felis catus ENSFCAG00000026385 N 0.000
ENSGGOG00000025393 Gorilla gorilla ENSGGOG00000025393 N 0.000
TERF1 Gorilla gorilla ENSGGOG00000026727 N 0.000
TERF1 Homo sapiens ENSG00000147601 N 0.000
ENSSTOG00000026069 Ictidomys tridecemlineatus ENSSTOG00000026069 N 0.000
ENSSTOG00000025051 Ictidomys tridecemlineatus ENSSTOG00000025051 N 0.000
ENSSTOG00000004560 Ictidomys tridecemlineatus ENSSTOG00000004560 N 0.000
TERF1 Loxodonta africana ENSLAFG00000004308 N 0.000
ENSP00000276603 Macaca fascicularis ENSP00000276603 N 0.000
TERF1 Macaca mulatta ENSMMUG00000023208 N 0.000
ENSMODG00000025642 Monodelphis domestica ENSMODG00000025642 N 0.000
ENSMPUG00000010251 Mustela putorius furo ENSMPUG00000010251 N 0.000
Terf1 Mus musculus ENSMUSG00000025925 N 0.000
Myotis_brandtii_TERF1_10031667 Myotis brandtii Myotis_brandtii_TERF1_10031667 N 0.000
TERF1 Myotis lucifugus ENSMLUG00000012171 N 0.000
TERF1 Ornithorhynchus anatinus ENSOANG00000001722 N 0.000
ENSOCUG00000002793 Oryctolagus cuniculus ENSOCUG00000002793 N 0.000
ENSOGAG00000033284 Otolemur garnettii ENSOGAG00000033284 N 0.000
ENSOGAG00000005848 Otolemur garnettii ENSOGAG00000005848 N 0.000
ENSOARG00000005381 Ovis aries ENSOARG00000005381 N 0.000
TERF1 Pan troglodytes ENSPTRG00000022919 N 0.000
ENSPANG00000025943 Papio anubis ENSPANG00000025943 N 0.000
ENSPPYG00000018669 Pongo abelii ENSPPYG00000018669 N 0.000
ENSPPYG00000018261 Pongo abelii ENSPPYG00000018261 N 0.000
ENSPPYG00000003709 Pongo abelii ENSPPYG00000003709 N 0.000
TERF1 Procavia capensis ENSPCAG00000007698 N 0.000
TERF1 Pteropus vampyrus ENSPVAG00000003792 N 0.000
Terf1 Rattus norvegicus ENSRNOG00000007291 N 0.000
TERF1 Sus scrofa ENSSSCG00000006184 N 0.000
ENSTSYG00000006478 Tarsius syrichta ENSTSYG00000006478 N 0.000
TERF1 Tupaia belangeri ENSTBEG00000011779 N 0.000
TERF1 Tursiops truncatus ENSTTRG00000003745 N 0.000
TERF1 Vicugna pacos ENSVPAG00000000533 N 0.000