Eucgr.A02086 (Eucalyptus grandis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Eucgr.A02086 T196512_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.857 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.851 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.851 0.833
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.806
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.806
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.843 0.806
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.843 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.843 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.843 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.837 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.837 0.833
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.823 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.750
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02086.1 GATA 210 245

Links

Other GATA family TFs
Other Eucalyptus grandis TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_12825 Aegilops tauschii F775_12825 N
F775_13070 Aegilops tauschii F775_13070 N
F775_16499 Aegilops tauschii F775_16499 N
F775_18370 Aegilops tauschii F775_18370 N
F775_18558 Aegilops tauschii F775_18558 N
F775_18978 Aegilops tauschii F775_18978 N
F775_21193 Aegilops tauschii F775_21193 N
F775_27817 Aegilops tauschii F775_27817 N
F775_05738 Aegilops tauschii F775_05738 N
MLOC_56903 Hordeum vulgare MLOC_56903 N
MLOC_68932 Hordeum vulgare MLOC_68932 N
OPUNC06G07700 Oryza punctata OPUNC06G07700 N
Traes_6AS_7B7540F6D Triticum aestivum Traes_6AS_7B7540F6D N
Traes_6DS_186AD71E4 Triticum aestivum Traes_6DS_186AD71E4 N
Traes_6DS_1CC9DD1EC Triticum aestivum Traes_6DS_1CC9DD1EC N
Traes_6BS_D8B7C37B0 Triticum aestivum Traes_6BS_D8B7C37B0 N
Traes_6DS_2185308F3 Triticum aestivum Traes_6DS_2185308F3 N
Traes_6DS_48337A953 Triticum aestivum Traes_6DS_48337A953 N
Traes_6DS_5878FA87F Triticum aestivum Traes_6DS_5878FA87F N
Traes_6DS_87E97B55C Triticum aestivum Traes_6DS_87E97B55C N
Traes_6DS_BF460054E Triticum aestivum Traes_6DS_BF460054E N
Traes_6DS_FB434BB3C Triticum aestivum Traes_6DS_FB434BB3C N
Traes_7BS_598310C32 Triticum aestivum Traes_7BS_598310C32 N
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N
Traes_6BS_AEF9F3C00 Triticum aestivum Traes_6BS_AEF9F3C00 N
Traes_6BS_7F1846171 Triticum aestivum Traes_6BS_7F1846171 N
Traes_6BS_1E0D70258 Triticum aestivum Traes_6BS_1E0D70258 N
Traes_6AS_B24138E62 Triticum aestivum Traes_6AS_B24138E62 N
Traes_6AS_36EAEADDD Triticum aestivum Traes_6AS_36EAEADDD N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_4AL_3A009739E Triticum aestivum Traes_4AL_3A009739E N
Traes_3AS_D6334436F Triticum aestivum Traes_3AS_D6334436F N
Traes_1DL_5E046EFA0 Triticum aestivum Traes_1DL_5E046EFA0 N
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
Traes_1BL_A8B8F33D9 Triticum aestivum Traes_1BL_A8B8F33D9 N
Traes_1AL_3C796C3D3 Triticum aestivum Traes_1AL_3C796C3D3 N
TRIUR3_06343 Triticum urartu TRIUR3_06343 N
TRIUR3_06344 Triticum urartu TRIUR3_06344 N
TRIUR3_06575 Triticum urartu TRIUR3_06575 N
TRIUR3_31592 Triticum urartu TRIUR3_31592 N