evm.TU.supercontig_6.118 (Carica papaya)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 evm.TU.supercontig_6.118 T196551_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.118 GATA 142 177

Links

Other GATA family TFs
Other Carica papaya TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACUA008027 Anopheles culicifacies ACUA008027 N 0.000
AMAM002480 Anopheles maculatus AMAM002480 N 0.000
AMIN008664 Anopheles minimus AMIN008664 N 0.000
estExt_fgenesh2_pm.C_2200002 Branchiostoma floridae estExt_fgenesh2_pm.C_2200002 N 0.000
Brh_R002088 Buceros rhinoceros Brh_R002088 N 0.000
swi/snf Ciona intestinalis ENSCING00000004110 N 0.000
ENSCSAVG00000004620 Ciona savignyi ENSCSAVG00000004620 N 0.000
csin106540 Clonorchis sinensis csin106540 N 0.000
CGI_10021531 Crassostrea gigas CGI_10021531 N 0.000
YQE_02907 Dendroctonus ponderosae YQE_02907 N 0.000
DILT_0001089701 Diphyllobothrium latum DILT_0001089701 N 0.000
ECANG7_04410 Echinococcus canadensis ECANG7_04410 N 0.000
EmuJ_001187700 Echinococcus multilocularis EmuJ_001187700 N 0.000
ENSEEUG00000014927 Erinaceus europaeus ENSEEUG00000014927 N 0.000
D915_01091 Fasciola hepatica D915_01091 N 0.000
ENSGGOG00000012841 Gorilla gorilla ENSGGOG00000012841 N 0.000
HMEL004008 Heliconius melpomene HMEL004008 N 0.000
TTAC_0000153401 Hydatigera taeniaeformis TTAC_0000153401 N 0.000
HDID_0000819001 Hymenolepis diminuta HDID_0000819001 N 0.000
HmN_000065900 Hymenolepis microstoma HmN_000065900 N 0.000
HNAJ_0000675501 Hymenolepis nana HNAJ_0000675501 N 0.000
LDEC005088 Leptinotarsa decemlineata LDEC005088 N 0.000
Ocbimv22035363m.g Octopus bimaculoides Ocbimv22035363m.g N 0.000
T265_00769 Opisthorchis viverrini T265_00769 N 0.000
ENSPMAG00000007461 Petromyzon marinus ENSPMAG00000007461 N 0.000
scaffold164-EXSNAP2012.18 Pristionchus exspectatus scaffold164-EXSNAP2012.18 N 0.000
SMARCA1 Pteropus vampyrus ENSPVAG00000003805 N 0.000
Smarca5 Rattus norvegicus ENSRNOG00000021584 N 0.000
nRc.2.0.1.g17886 Romanomermis culicivorax nRc.2.0.1.g17886 N 0.000
Sakowv30022101m.g Saccoglossus kowalevskii Sakowv30022101m.g N 0.000
ENSSHAG00000013518 Sarcophilus harrisii ENSSHAG00000013518 N 0.000
SCUD_0000101601 Schistosoma curassoni SCUD_0000101601 N 0.000
A_03823 Schistosoma haematobium A_03823 N 0.000
Sjc_0053770 Schistosoma japonicum Sjc_0053770 N 0.000
Smp_008830 Schistosoma mansoni Smp_008830 N 0.000
SMRZ_0002157401 Schistosoma margrebowiei SMRZ_0002157401 N 0.000
SMU15038703 Schmidtea mediterranea SMU15038703 N 0.000
SPER_0002845401 Spirometra erinaceieuropaei SPER_0002845401 N 0.000
SPER_0000373001 Spirometra erinaceieuropaei SPER_0000373001 N 0.000
SMAR014171 Strigamia maritima SMAR014171 N 0.000
SPU_016575 Strongylocentrotus purpuratus SPU_016575 N 0.000
TsM_000501300 Taenia solium TsM_000501300 N 0.000
ENSTGUG00000015201 Taeniopygia guttata ENSTGUG00000015201 N 0.000
ENSTSYG00000004240 Tarsius syrichta ENSTSYG00000004240 N 0.000
tetur03g08660 Tetranychus urticae tetur03g08660 N 0.000
EFV57661 Trichinella spiralis EFV57661 N 0.000
EFV57612 Trichinella spiralis EFV57612 N 0.000
ENSVPAG00000010492 Vicugna pacos ENSVPAG00000010492 N 0.000
L798_15354 Zootermopsis nevadensis L798_15354 N 0.000