Gorai.008G142200 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.008G142200 T196603_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.836 0.806
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.816 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.816 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G142200.1 GATA 16 51

Links

Other GATA family TFs
Other Gossypium raimondii TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin111886 Clonorchis sinensis csin111886 N
DILT_0001915201 Diphyllobothrium latum DILT_0001915201 N
ECANG7_05482 Echinococcus canadensis ECANG7_05482 N
EmuJ_000768400 Echinococcus multilocularis EmuJ_000768400 N
TTAC_0000435501 Hydatigera taeniaeformis TTAC_0000435501 N
MCOS_0000726601 Mesocestoides corti MCOS_0000726601 N
T265_08622 Opisthorchis viverrini T265_08622 N
SCUD_0000067801 Schistosoma curassoni SCUD_0000067801 N
Sjc_0087810 Schistosoma japonicum Sjc_0087810 N
Smp_103540 Schistosoma mansoni Smp_103540 N
SROB_0000330501 Schistosoma rodhaini SROB_0000330501 N
TASK_0000901601 Taenia asiatica TASK_0000901601 N
TsM_000643400 Taenia solium TsM_000643400 N