Lus10000587.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10000587.g T196625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.827 0.853
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.827 0.824
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10000587 GATA 66 101

Links

Other GATA family TFs
Other Linum usitatissimum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF11102 Drosophila ananassae FBgn0088142 N
GH20627 Drosophila grimshawi FBgn0128090 N
lola Drosophila melanogaster FBgn0005630 D
GL17195 Drosophila persimilis FBgn0154798 N
GA30442 Drosophila pseudoobscura FBgn0264579 I
GK19011 Drosophila willistoni FBgn0221009 N