Lus10028301.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10028301.g T196642_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028301 GATA 68 103

Links

Other GATA family TFs
Other Linum usitatissimum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003968 Aedes aegypti AAEL003968 N
AALB008486 Anopheles albimanus AALB008486 N
AARA009005 Anopheles arabiensis AARA009005 N
AATE001469 Anopheles atroparvus AATE001469 N
ACHR004577 Anopheles christyi ACHR004577 N
ACOM027442 Anopheles coluzzii ACOM027442 N
ACUA008027 Anopheles culicifacies ACUA008027 N
ADAC000396 Anopheles darlingi ADAC000396 N
ADIR009502 Anopheles dirus ADIR009502 N
AEPI007981 Anopheles epiroticus AEPI007981 N
AFAF015825 Anopheles farauti AFAF015825 N
AGAP010700 Anopheles gambiae AGAP010700 N
AMAM002480 Anopheles maculatus AMAM002480 N
AMEC018533 Anopheles melas AMEC018533 N
AMEM011057 Anopheles merus AMEM011057 N
AMIN008662 Anopheles minimus AMIN008662 N
AMIN008664 Anopheles minimus AMIN008664 N
AQUA002391 Anopheles quadriannulatus AQUA002391 N
GB49325 Apis mellifera GB49325 N
ENSAMXG00000005709 Astyanax mexicanus ENSAMXG00000005709 N
ACEP19763 Atta cephalotes ACEP19763 N
estExt_fgenesh2_pm.C_2200002 Branchiostoma floridae estExt_fgenesh2_pm.C_2200002 N
Brh_R002088 Buceros rhinoceros Brh_R002088 N
Cflo_07758--XP_396195.2_APIME Camponotus floridanus Cflo_07758--XP_396195.2_APIME N
Cmyd_10005769 Chelonia mydas Cmyd_10005769 N
CLEC009664 Cimex lectularius CLEC009664 N
swi/snf Ciona intestinalis ENSCING00000004110 N
ENSCSAVG00000004620 Ciona savignyi ENSCSAVG00000004620 N
csin106540 Clonorchis sinensis csin106540 N
CGI_10021531 Crassostrea gigas CGI_10021531 N
CpipJ_CPIJ011038 Culex pipiens CpipJ_CPIJ011038 N
CPIJ011038 Culex quinquefasciatus CPIJ011038 N
YQE_02907 Dendroctonus ponderosae YQE_02907 N
DILT_0001089701 Diphyllobothrium latum DILT_0001089701 N
DME_0000758101 Dracunculus medinensis DME_0000758101 N
ECANG7_04410 Echinococcus canadensis ECANG7_04410 N
EmuJ_001187700 Echinococcus multilocularis EmuJ_001187700 N
ENSEEUG00000014927 Erinaceus europaeus ENSEEUG00000014927 N
D915_01091 Fasciola hepatica D915_01091 N
ENSGGOG00000012841 Gorilla gorilla ENSGGOG00000012841 N
Hsal_10566--XP_396195.2_APIME Harpegnathos saltator Hsal_10566--XP_396195.2_APIME N
HMEL004008 Heliconius melpomene HMEL004008 N
TTAC_0000153401 Hydatigera taeniaeformis TTAC_0000153401 N
LDEC005088 Leptinotarsa decemlineata LDEC005088 N
LotgiG182249 Lottia gigantea LotgiG182249 N
NV15374 Nasonia vitripennis NV15374 N
Ocbimv22035363m.g Octopus bimaculoides Ocbimv22035363m.g N
T265_00769 Opisthorchis viverrini T265_00769 N
ENSPMAG00000007461 Petromyzon marinus ENSPMAG00000007461 N
Smarca5 Rattus norvegicus ENSRNOG00000021584 N
Sakowv30022101m.g Saccoglossus kowalevskii Sakowv30022101m.g N
ENSSHAG00000013518 Sarcophilus harrisii ENSSHAG00000013518 N
Sjc_0053770 Schistosoma japonicum Sjc_0053770 N
SMU15038703 Schmidtea mediterranea SMU15038703 N
SINV15598 Solenopsis invicta SINV15598 N
SPER_0000373001 Spirometra erinaceieuropaei SPER_0000373001 N
SPER_0002845401 Spirometra erinaceieuropaei SPER_0002845401 N
SMAR014171 Strigamia maritima SMAR014171 N
TsM_000501300 Taenia solium TsM_000501300 N
ENSTGUG00000015201 Taeniopygia guttata ENSTGUG00000015201 N
ENSTSYG00000004240 Tarsius syrichta ENSTSYG00000004240 N
tetur03g08660 Tetranychus urticae tetur03g08660 N
ENSVPAG00000010492 Vicugna pacos ENSVPAG00000010492 N
L798_15354 Zootermopsis nevadensis L798_15354 N